l-半胱氨酸脱硫酶SufS中d -半胱氨酸与吡哆醛-5′-磷酸反应中噻唑烷环形成的可视化

IF 2.2 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Biochemical and biophysical research communications Pub Date : 2025-03-25 Epub Date: 2025-02-19 DOI:10.1016/j.bbrc.2025.151497
Ryosuke Nakamura, Takashi Fujishiro
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引用次数: 0

摘要

吡哆醛-5′-磷酸(PLP)与半胱氨酸及其衍生物的反应性越来越引起人们的兴趣,因为相应的产物,噻唑烷PLP-半胱氨酸加合物,可以通过PLP依赖的酶促反应和非酶促反应形成。在这里,我们报道了d -半胱氨酸与PLP在SufS(一种PLP依赖的l -半胱氨酸脱硫酶)中反应形成噻唑烷的生化和x射线晶体快照。通过比较L-和d -青霉胺结合的SufS晶体与d -半胱氨酸SufS晶体中没有形成噻唑烷,我们提出了一种噻唑烷的形成机制,其重要因素是:Ala28-Ala29的羰基和lys224介导的碱催化d -半胱氨酸亲核硫化物的极性环境。
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Visualizing thiazolidine ring formation in the reaction of D-cysteine and pyridoxal-5′-phosphate within L-cysteine desulfurase SufS
The reactivity of pyridoxal-5′-phosphate (PLP) with cysteine and its derivatives has been of increasing interest because the corresponding product, a thiazolidine PLP-cysteine adduct, can be formed via PLP-dependent enzymatic and non-enzymatic reactions. Here, we report biochemical and X-ray crystallographic snapshots of thiazolidine formation in reaction of D-cysteine with PLP in SufS, a PLP-dependent L-cysteine desulfurase. By comparing L- and D-penicillamine-bound SufS showing no thiazolidine formation in the crystals with D-cysteine SufS, we proposed a thiazolidine formation mechanism with important factors: the polar environments provided by the carbonyl groups of Ala28-Ala29 and Lys224-mediated base catalysis for the nucleophilic thiolate of D-cysteine.
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来源期刊
Biochemical and biophysical research communications
Biochemical and biophysical research communications 生物-生化与分子生物学
CiteScore
6.10
自引率
0.00%
发文量
1400
审稿时长
14 days
期刊介绍: Biochemical and Biophysical Research Communications is the premier international journal devoted to the very rapid dissemination of timely and significant experimental results in diverse fields of biological research. The development of the "Breakthroughs and Views" section brings the minireview format to the journal, and issues often contain collections of special interest manuscripts. BBRC is published weekly (52 issues/year).Research Areas now include: Biochemistry; biophysics; cell biology; developmental biology; immunology ; molecular biology; neurobiology; plant biology and proteomics
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