基于高级提示点的弱监督前列腺三维MRI图像分割。

IF 6.8 2区 医学 Q1 COMPUTER SCIENCE, INFORMATION SYSTEMS IEEE Journal of Biomedical and Health Informatics Pub Date : 2025-02-19 DOI:10.1109/JBHI.2025.3543444
Jie Zou, Mengxing Huang, Yu Zhang, Zhiyuan Zhang, Wenjie Zhou, Uzair Aslam Bhatti, Jing Chen, Zhiming Bai
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引用次数: 0

摘要

在前列腺3D MRI图像分割方法中,通常需要对每个切片进行注释,这些注释通常耗时且专业化。在本研究中,我们使用一个前景种子点和六个边缘松弛点的注释方法生成伪标签。我们设计了一个弱监督语义学习分割框架,ACEA-Net。该分割框架解决了伪标记生成过程中由于种子点像素缺乏语义亲和力而导致的扩展不足问题。为了提供更完整的监督信号,我们设计了一种种子簇测地线距离变换(SeedGeo)的种子展开策略。在分割模型训练阶段,采用自适应卷积归一化(Adaptive Convolutional Normalization, ACN)和增强简单无参数注意模块(Enhanced Simple Simple - free Attention Module, SimAM)对U-Net基线模型中的卷积层输出进行平滑处理,抑制噪声标签。所提出的分割框架在MSD前列腺和PROMISE12前列腺数据集上取得了良好的分割效果,两个分割任务的Dice相似系数(Dice)分别为87.23%和81.00%,平均对称面距离(ASSD)分别为1.73mm和2.02mm,优于目前最先进的方法。
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ACEA-Net: Weakly Supervised Prostate 3D MRI Image Segmentation via Advanced Prompt Points.

In prostate 3D MRI image segmentation methods, it is usually necessary to annotate each slice, and these annotations are generally time-consuming and specialized. In this study, we generate pseudo-labels using an annotation method with one foreground seed point and six edge relaxation points. We design a weakly supervised semantic learning segmentation framework, ACEA-Net. This segmentation framework solves the under-expansion problem due to the lack of semantic affinity of the seed point pixels in the pseudo-labeling generation process. We design a Seed Cluster Geodesic Distance Transform (SeedGeo) seed expansion strategy to provide a more complete supervised signal. In the segmentation model training phase, Adaptive Convolutional Normalization (ACN) and Enhanced Simple Parameter-Free Attention Module (SimAM) are utilized to smooth the convolutional layer's output in the U-Net baseline model to suppress noisy labels. The proposed segmentation framework achieves excellent segmentation results on the MSD prostate and PROMISE12 prostate datasets, with Dice similarity coefficients (Dice) of 87.23% and 81.00% for the two segmentation tasks, and Average Symmetry Surface Distances (ASSD) of 1.73mm and 2.02mm, respectively, which are superior to the current state-of-the-art method.

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来源期刊
IEEE Journal of Biomedical and Health Informatics
IEEE Journal of Biomedical and Health Informatics COMPUTER SCIENCE, INFORMATION SYSTEMS-COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS
CiteScore
13.60
自引率
6.50%
发文量
1151
期刊介绍: IEEE Journal of Biomedical and Health Informatics publishes original papers presenting recent advances where information and communication technologies intersect with health, healthcare, life sciences, and biomedicine. Topics include acquisition, transmission, storage, retrieval, management, and analysis of biomedical and health information. The journal covers applications of information technologies in healthcare, patient monitoring, preventive care, early disease diagnosis, therapy discovery, and personalized treatment protocols. It explores electronic medical and health records, clinical information systems, decision support systems, medical and biological imaging informatics, wearable systems, body area/sensor networks, and more. Integration-related topics like interoperability, evidence-based medicine, and secure patient data are also addressed.
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