使用逼真合成数据的肌肉组织病理学中基于深度学习的图像分析。

IF 5.4 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Communications medicine Pub Date : 2025-03-06 DOI:10.1038/s43856-025-00777-y
Leonid Mill, Oliver Aust, Jochen A Ackermann, Philipp Burger, Monica Pascual, Katrin Palumbo-Zerr, Gerhard Krönke, Stefan Uderhardt, Georg Schett, Christoph S Clemen, Christian Holtzhausen, Samir Jabari, Rolf Schröder, Andreas Maier, Anika Grüneboom
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引用次数: 0

摘要

背景:人工智能(AI),特别是深度学习(DL),已经彻底改变了生物医学图像分析,但其功效受到需要具有代表性的高质量大型数据集和手动注释的限制。尽管使用基于人工智能的生成模型的合成数据的最新研究显示出解决这一问题的有希望的结果,但仍然存在一些挑战,例如缺乏可解释性和需要大量的真实数据。本研究旨在引入一种新的方法- synta,用于生成逼真的合成生物医学图像数据,以解决与最先进的生成模型和基于dl的图像分析相关的挑战。方法:SYNTA方法采用全参数化方法创建适合特定生物医学任务的逼真合成训练数据集。其适用性在肌肉组织病理学和骨骼肌分析的背景下进行了测试。在两个真实数据集上对这种新方法进行了评估,以验证其在真实数据上解决复杂图像分析任务的适用性。结果:在这里,我们表明SYNTA能够仅使用合成训练数据对未见过的真实世界生物医学数据进行专家级分割。通过解决缺乏代表性和高质量的真实世界训练数据的问题,SYNTA在肌肉组织病理学图像分析方面实现了强大的性能,为生成式对抗网络(gan)或扩散模型等生成式模型提供了可扩展、可控和可解释的替代方案。结论:SYNTA在加速和改进生物医学图像分析方面具有很大的潜力。它能够生成高质量的逼真合成数据,减少了对大量数据收集和手动注释的依赖,为组织病理学和医学研究的进步铺平了道路。
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Deep learning-based image analysis in muscle histopathology using photo-realistic synthetic data.

Background: Artificial intelligence (AI), specifically Deep learning (DL), has revolutionized biomedical image analysis, but its efficacy is limited by the need for representative, high-quality large datasets with manual annotations. While latest research on synthetic data using AI-based generative models has shown promising results to tackle this problem, several challenges such as lack of interpretability and need for vast amounts of real data remain. This study aims to introduce a new approach-SYNTA-for the generation of photo-realistic synthetic biomedical image data to address the challenges associated with state-of-the art generative models and DL-based image analysis.

Methods: The SYNTA method employs a fully parametric approach to create photo-realistic synthetic training datasets tailored to specific biomedical tasks. Its applicability is tested in the context of muscle histopathology and skeletal muscle analysis. This new approach is evaluated for two real-world datasets to validate its applicability to solve complex image analysis tasks on real data.

Results: Here we show that SYNTA enables expert-level segmentation of unseen real-world biomedical data using only synthetic training data. By addressing the lack of representative and high-quality real-world training data, SYNTA achieves robust performance in muscle histopathology image analysis, offering a scalable, controllable and interpretable alternative to generative models such as Generative Adversarial Networks (GANs) or Diffusion Models.

Conclusions: SYNTA demonstrates great potential to accelerate and improve biomedical image analysis. Its ability to generate high-quality photo-realistic synthetic data reduces reliance on extensive collection of data and manual annotations, paving the way for advancements in histopathology and medical research.

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