用于癌症检测和识别的微流体装置原型的验证:基于细胞轨迹分析的循环肿瘤细胞分类,利用基于细胞的建模和机器学习

IF 2.4 4区 医学 Q3 ENGINEERING, BIOMEDICAL International Journal for Numerical Methods in Biomedical Engineering Pub Date : 2025-04-24 DOI:10.1002/cnm.70037
Rifat Rejuan, Eugenio Aulisa, Wei Li, Travis Thompson, Sanjoy Kumar, Suncica Canic, Yifan Wang
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引用次数: 0

摘要

微流控装置(MDs)提供了一种检测循环肿瘤细胞(ctc)的新方法,通过靶向技术和目视检测增强了检测过程。然而,目前的方法往往产生异质的CTC群体,需要额外的处理来进行综合分析和表型鉴定。这些程序通常是昂贵的,耗时的,并且需要由熟练的技术人员执行。在这项研究中,我们研究了一种具有成本效益和高效的超均匀微博MD方法用于CTC分类的潜力。我们的方法结合了模拟微流体通道中流体结构相互作用的数学建模和机器学习技术。具体来说,我们开发了一个基于细胞的建模框架来评估红细胞负载血浆流动中的CTC动力学,生成了一个CTC轨迹的大型数据集,该数据集解释了两种不同的CTC表型。然后使用卷积神经网络(CNN)和递归神经网络(RNN)对数据集进行分析并对这些表型进行分类。结果表明,超均匀微柱MD设计和分析方法在基于细胞轨迹区分不同CTC表型方面具有潜在的有效性,为早期癌症检测提供了一条有希望的途径。
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Validation of a Microfluidic Device Prototype for Cancer Detection and Identification: Circulating Tumor Cells Classification Based on Cell Trajectory Analysis Leveraging Cell-Based Modeling and Machine Learning

Microfluidic devices (MDs) present a novel method for detecting circulating tumor cells (CTCs), enhancing the process through targeted techniques and visual inspection. However, current approaches often yield heterogeneous CTC populations, necessitating additional processing for comprehensive analysis and phenotype identification. These procedures are often expensive, time-consuming, and need to be performed by skilled technicians. In this study, we investigate the potential of a cost-effective and efficient hyperuniform micropost MD approach for CTC classification. Our approach combines mathematical modeling of fluid–structure interactions in a simulated microfluidic channel with machine learning techniques. Specifically, we developed a cell-based modeling framework to assess CTC dynamics in erythrocyte-laden plasma flow, generating a large dataset of CTC trajectories that account for two distinct CTC phenotypes. Convolutional neural network (CNN) and recurrent neural network (RNN) were then employed to analyze the dataset and classify these phenotypes. The results demonstrate the potential effectiveness of the hyperuniform micropost MD design and analysis approach in distinguishing between different CTC phenotypes based on cell trajectory, offering a promising avenue for early cancer detection.

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来源期刊
International Journal for Numerical Methods in Biomedical Engineering
International Journal for Numerical Methods in Biomedical Engineering ENGINEERING, BIOMEDICAL-MATHEMATICAL & COMPUTATIONAL BIOLOGY
CiteScore
4.50
自引率
9.50%
发文量
103
审稿时长
3 months
期刊介绍: All differential equation based models for biomedical applications and their novel solutions (using either established numerical methods such as finite difference, finite element and finite volume methods or new numerical methods) are within the scope of this journal. Manuscripts with experimental and analytical themes are also welcome if a component of the paper deals with numerical methods. Special cases that may not involve differential equations such as image processing, meshing and artificial intelligence are within the scope. Any research that is broadly linked to the wellbeing of the human body, either directly or indirectly, is also within the scope of this journal.
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