从苏丹和肯尼亚豆科树木中分离的Sinorhizobium arboris sp. 11和Sinorhizobium kostiense sp. 11。

G Nick, P de Lajudie, B D Eardly, S Suomalainen, L Paulin, X Zhang, M Gillis, K Lindström
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引用次数: 158

摘要

采用总蛋白SDS-PAGE技术对从塞内加尔刺槐(Acacia senegal)和智利Prosopis chilensis根瘤中分离的25株苏丹菌株和5株肯尼亚菌株进行了分类。采用多位点酶电泳(MLEE)对20株菌株进行了研究,并对代表两大群的2株菌株进行了16S rRNA全基因测序。这些结果,连同先前报道的数值分类分析、脉冲场凝胶电泳研究、DNA-DNA斑点杂交、基于重复序列的PCR基因组指纹图谱、DNA碱基组成分析、DNA-DNA再关联分析、16S rRNA基因部分测序和扩增的16S rRNA基因的RFLP分析,表明所有30株菌株都属于Sinorhizobium属。其中2株与萨赫利中华根瘤菌属属,7株与terangae中华根瘤菌属属,其余未与任何已建立的种属属。大多数菌株形成了两个表型和基因典型不同的群体,因此我们建议将这些菌株分类为两个新种,即Sinorhizobium arboris sp. 11和Sinorhizobium kostiense sp. nov。
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Sinorhizobium arboris sp. nov. and Sinorhizobium kostiense sp. nov., isolated from leguminous trees in Sudan and Kenya.

SDS-PAGE of total bacterial proteins was applied to the classification of 25 Sudanese and five Kenyan strains isolated from the root nodules of Acacia senegal and Prosopis chilensis. Twenty strains were also studied by multilocus enzyme electrophoresis (MLEE) and the whole 16S rRNA gene was sequenced from two strains representing the two major clusters. These results, together with the previously reported numerical taxonomy analysis, pulsed-field gel electrophoresis studies, DNA-DNA dot-blot hybridization, genomic fingerprinting using repetitive sequence-based PCR, DNA base composition analysis, DNA-DNA reassociation analysis, partial sequencing of the 16S rRNA gene and RFLP analysis of the amplified 16S rRNA gene, showed that all 30 strains belong to the genus Sinorhizobium. Two of the strains grouped with Sinorhizobium saheli and seven with Sinorhizobium terangae, while the rest did not cluster with any of the established species. The majority of the strains formed two phenotypically and genotypically distinct groups and we therefore propose that these strains should be classified as two new species, Sinorhizobium arboris sp. nov. and Sinorhizobium kostiense sp. nov.

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