缅甸巨型蚯蚓Tonoscolex birmanicus的线粒体全基因组(Clitellata: Megascolecidae)。

Mitochondrial Dna Pub Date : 2015-06-01 Epub Date: 2013-09-19 DOI:10.3109/19401736.2013.830300
Ah Rha Wang, Yong Hong, Tin Moe Win, Iksoo Kim
{"title":"缅甸巨型蚯蚓Tonoscolex birmanicus的线粒体全基因组(Clitellata: Megascolecidae)。","authors":"Ah Rha Wang,&nbsp;Yong Hong,&nbsp;Tin Moe Win,&nbsp;Iksoo Kim","doi":"10.3109/19401736.2013.830300","DOIUrl":null,"url":null,"abstract":"<p><p>Until now the complete mitochondrial genome (mitogenome) sequences of only three species of clitellate have been available. We have determined the complete mitogenome sequences of the elusive Burmese giant earthworm Tonoscolex birmanicus (Clitellata: Megascolecidae), which is endemic to Myanmar. The 15,170-bp long genome contains the 37 genes typical of metazoan mitogenomes [13 protein-coding genes (PCG), 2 rRNA genes and 22 tRNA genes] and 1 major non-coding region. All of the 37 genes are transcribed from the same DNA strand. The arrangement of the T. birmanicus mitogenome is identical to that of two within-ordinal species Lumbricus terrestris and Perionyx excavates. All 13 PCGs start with the ATG. For the stop codon, only six PCGs end with the TAA, whereas the remaining ones ends with the incomplete stop codon, T. Genes overlap in a total of 14 bp in five locations, and harbor a total of 16 bp of intergenic spacer sequences in nine locations. </p>","PeriodicalId":49805,"journal":{"name":"Mitochondrial Dna","volume":"26 3","pages":"467-8"},"PeriodicalIF":0.0000,"publicationDate":"2015-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.3109/19401736.2013.830300","citationCount":"15","resultStr":"{\"title\":\"Complete mitochondrial genome of the Burmese giant earthworm, Tonoscolex birmanicus (Clitellata: Megascolecidae).\",\"authors\":\"Ah Rha Wang,&nbsp;Yong Hong,&nbsp;Tin Moe Win,&nbsp;Iksoo Kim\",\"doi\":\"10.3109/19401736.2013.830300\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Until now the complete mitochondrial genome (mitogenome) sequences of only three species of clitellate have been available. We have determined the complete mitogenome sequences of the elusive Burmese giant earthworm Tonoscolex birmanicus (Clitellata: Megascolecidae), which is endemic to Myanmar. The 15,170-bp long genome contains the 37 genes typical of metazoan mitogenomes [13 protein-coding genes (PCG), 2 rRNA genes and 22 tRNA genes] and 1 major non-coding region. All of the 37 genes are transcribed from the same DNA strand. The arrangement of the T. birmanicus mitogenome is identical to that of two within-ordinal species Lumbricus terrestris and Perionyx excavates. All 13 PCGs start with the ATG. For the stop codon, only six PCGs end with the TAA, whereas the remaining ones ends with the incomplete stop codon, T. Genes overlap in a total of 14 bp in five locations, and harbor a total of 16 bp of intergenic spacer sequences in nine locations. </p>\",\"PeriodicalId\":49805,\"journal\":{\"name\":\"Mitochondrial Dna\",\"volume\":\"26 3\",\"pages\":\"467-8\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2015-06-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://sci-hub-pdf.com/10.3109/19401736.2013.830300\",\"citationCount\":\"15\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Mitochondrial Dna\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.3109/19401736.2013.830300\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2013/9/19 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Mitochondrial Dna","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3109/19401736.2013.830300","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2013/9/19 0:00:00","PubModel":"Epub","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 15

摘要

到目前为止,只有三种纤毛虫的线粒体全基因组(有丝分裂基因组)序列是可用的。我们确定了缅甸特有的难以捉摸的缅甸巨型蚯蚓Tonoscolex birmanicus (Clitellata: Megascolecidae)的完整有丝分裂基因组序列。15,170 bp长的基因组包含37个后生动物有丝分裂基因组的典型基因[13个蛋白质编码基因(PCG), 2个rRNA基因和22个tRNA基因]和1个主要的非编码区。所有的37个基因都是从同一条DNA链转录而来的。T. birmanicus有丝分裂基因组的排列与两个同序物种Lumbricus terrestris和Perionyx excavates相同。所有13个pcg都以ATG开头。对于终止密码子,只有6个PCGs以TAA结尾,而其余的PCGs以不完整的终止密码子t结尾。基因在5个位置共重叠14bp,在9个位置共包含16bp的基因间间隔序列。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Complete mitochondrial genome of the Burmese giant earthworm, Tonoscolex birmanicus (Clitellata: Megascolecidae).

Until now the complete mitochondrial genome (mitogenome) sequences of only three species of clitellate have been available. We have determined the complete mitogenome sequences of the elusive Burmese giant earthworm Tonoscolex birmanicus (Clitellata: Megascolecidae), which is endemic to Myanmar. The 15,170-bp long genome contains the 37 genes typical of metazoan mitogenomes [13 protein-coding genes (PCG), 2 rRNA genes and 22 tRNA genes] and 1 major non-coding region. All of the 37 genes are transcribed from the same DNA strand. The arrangement of the T. birmanicus mitogenome is identical to that of two within-ordinal species Lumbricus terrestris and Perionyx excavates. All 13 PCGs start with the ATG. For the stop codon, only six PCGs end with the TAA, whereas the remaining ones ends with the incomplete stop codon, T. Genes overlap in a total of 14 bp in five locations, and harbor a total of 16 bp of intergenic spacer sequences in nine locations.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Mitochondrial Dna
Mitochondrial Dna 生物-遗传学
自引率
0.00%
发文量
0
审稿时长
2.4 months
期刊介绍: Previously published under the title DNA Sequence (Vols 1-19.3), Mitochondrial DNA accepts original high-quality reports based on mapping, sequencing and analysis of mitochondrial DNA and RNA. Descriptive papers on DNA sequences from mitochondrial genomes, and also analytical papers in the areas of population genetics, medical genetics, phylogenetics and human evolution that use mitochondrial DNA as a source of evidence for studies will be considered for publication. The editorial board will also consider manuscripts that examine population genetic and systematic theory that specifically address the use of mitochondrial DNA sequences.
期刊最新文献
Mitochondrial DNA: Methods and Protocols Genetic variation in the Chinese soft-shell turtles (Pelodiscus spp.) revealed by sequences of mitochondrial Cytb gene Complete chloroplast genome sequence of Castanopsis concinna (Fagaceae), a threatened species from Hong Kong and South-Eastern China. The complete mitochondrial genome of the Shaziling pig. The complete mitochondrial genome of the Ningxiang pig.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1