新分离的农业短芽孢杆菌ST15c10蛋白的双羧甲基纤维素酶和明胶酶活性在底物利用中具有互反规律。

IF 1.2 Q2 Biochemistry, Genetics and Molecular Biology Journal of Molecular Microbiology and Biotechnology Pub Date : 2017-01-01 Epub Date: 2017-12-02 DOI:10.1159/000479109
Smarajit Maiti, Tanmoy Samanta, Sumit Sahoo, Sudipta Roy
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引用次数: 4

摘要

从一株新分离的细菌(ST15c10)中制备了具有内切葡聚糖酶-肽酶活性的蛋白。通过电镜图像和16S-rDNA序列鉴定ST15c10为农业短芽孢杆菌。HM446043),与B. agri (KZ17)/B序列同源性达98.9%。formosus (dsm - 9885 t) / B。短。酶纯化后均质,在Seralose 6B-150凝胶-基质/C-18柱的高效液相色谱中出现单峰。MALDI-TOF质谱和生物信息学研究显示,该基因与CelM家族的m42 -氨基肽酶/内切葡聚糖酶具有显著的相似性。这些酶存在于所有已知基因组序列的短芽孢杆菌菌株中。ST15c10在羧甲基纤维素(CMC)-明胶(40°C/pH 8-9)中生长最佳,在甘蔗渣浸水发酵中也表现出较强的生长/羧甲基纤维素酶(CMCase)活性。纯化后的酶还可作为固体甘蔗渣/稻草的内切葡聚糖酶。在cmc -聚丙烯酰胺凝胶上,通过酶谱分析显示其CMCase活性(在pH 5.6和60°C/Km = 35.5 μ M/Vmax = 1,024U时最佳),其强条带约为70 kDa。纯化后的酶还显示出很强的肽酶(明胶酶)活性(在6-12%明胶/1%明胶- page上酶谱分析时pH值为7.2/40°C)。70 kDa)。金属离子Mn/Cu/Fe/Co(50%)、Hg/KMnO4(100%)、葡萄糖或乳糖(50-75%)抑制CMCase活性;均为1mm)。2-巯基乙醇可以阻止Hg离子的剂量/时间依赖性抑制。农杆菌内切葡聚糖酶-氨基肽酶(ELK43520;350 aa)与m42家族的其他成员进行了比较,发现活性位点残基Cys256/Cys260是保守的,这些残基之前被确定为金属结合位点。内切葡聚糖酶活性的调节可能是通过金属结合引发的酶氧化还原状态的变化发生的。对这类酶的研究在基础科学和工业研究中具有重要意义。
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The Dual Carboxymethyl Cellulase and Gelatinase Activities of a Newly Isolated Protein from Brevibacillus agri ST15c10 Confer Reciprocal Regulations in Substrate Utilization.

A protein showing endoglucanase-peptidase activity was prepared from a newly isolated bacterium (ST15c10). We identified ST15c10 as Brevibacillus agri based on electron-microscopic images and its 16S-rDNA sequence (GenBank accession No. HM446043), which exhibits 98.9% sequence identity to B. agri (KZ17)/B. formosus (DSM-9885T)/B. brevis. The enzyme was purified to homogeneity and gave a single peak during high-performance liquid chromatography on a Seralose 6B-150 gel-matrix/C-18 column. MALDI-TOF mass-spectrometry and bioinformatics studies revealed significant similarity to M42-aminopeptidases/endoglucanases of the CelM family. These enzymes are found in all Brevibacillus strains for which the genome sequence is known. ST15c10 grows optimally on carboxymethyl cellulose (CMC)-gelatin (40°C/pH 8-9), and also shows strong growth/carboxymethyl cellulase (CMCase) activity in submerged bagasse fermentation. The purified enzyme also functions as endoglucanase with solid bagasse/rice straw. Its CMCase activity (optimal at pH 5.6 and 60°C/Km = 35.5 µM/Vmax = 1,024U) was visualized by zymography on a CMC-polyacrylamide gel, which provided a strong band of approximately 70 kDa. The purified enzyme also showed strong peptidase (gelatinase) activity (pH 7.2/40°C during zymography on 6-12% gelatin/1% gelatin-PAGE (at approx. 70 kDa). The CMCase activity is inhibited by the metal ions Mn/Cu/Fe/Co (50%), Hg/KMnO4 (100%), and by glucose or lactose (50-75%; all at 1 mM). The observed dose/time-dependent inhibition by Hg ions could be prevented with 2-mercaptoethanol. A comparison of the B. agri endoglucanase-aminopeptidase (ELK43520; 350 aa) with other members of the M42-family revealed the conservation of active-site residues Cys256/Cys260, which were previously identified as metal-binding sites. Regulation of the endoglucanase activity probably occurs via metal binding-triggered changes in the redox state of the enzyme. Studies on this type of enzyme are of high importance for basic scientific and industrial research.

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来源期刊
Journal of Molecular Microbiology and Biotechnology
Journal of Molecular Microbiology and Biotechnology 生物-生物工程与应用微生物
CiteScore
3.90
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>12 weeks
期刊介绍: We are entering a new and exciting era of microbiological study and application. Recent advances in the now established disciplines of genomics, proteomics and bioinformatics, together with extensive cooperation between academic and industrial concerns have brought about an integration of basic and applied microbiology as never before.
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Contents Front & Back Matter The Life Cycle of Dictyostelium discoideum Is Accelerated via MAP Kinase Cascade by a Culture Extract Produced by a Synthetic Microbial Consortium A Riboflavin Transporter in Bdellovibrio exovorous JSS Front & Back Matter
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