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IF 1.2 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2020-07-01 DOI: 10.1159/000510052
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引用次数: 0
Front & Back Matter 正面和背面
IF 1.2 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2020-07-01 DOI: 10.1159/000510490
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引用次数: 0
The Life Cycle of Dictyostelium discoideum Is Accelerated via MAP Kinase Cascade by a Culture Extract Produced by a Synthetic Microbial Consortium 由合成微生物群落产生的培养提取物通过MAP激酶级联加速盘基网柄菌的生命周期
IF 1.2 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-12-05 DOI: 10.1159/000504442
H. Kuwayama, T. Higashinakagawa
A cellular slime mold, Dictyostelium discoideum, is an amoeboid organism that has a unique life cycle consisting of distinctly separated vegetative and developmental phases. Thus, this organism presents a rare opportunity in which to examine the effects of bioactive substances on separate cellular activities. In this research, we investigated the effect of a culture extract, termed EMXG, produced by a synthetic microbial consortium. EMXG promoted proliferative response of amoeba cells. It further accelerated the developmental phase, leading to the preferred fruiting body formation from fewer cells. Furthermore, EMXG modulated biological rhythm of this organism, that is, interval of oscillation of cAMP level observed in suspension starvation was significantly shortened. Concomitantly, the level of ERKB, a MAP kinase, was found to oscillate in a similar fashion to that of cAMP. Additionally, ErkB-deficient mutant amoeboid cells did not respond to proliferative stimulation by EMXG. These lines of evidence point to a likelihood that MAP kinase cascade is involved and further that ErkB could be the molecular target of EMXG.
盘基网柄菌是一种细胞黏菌,是一种变形虫状生物,具有独特的生命周期,由明显分离的营养期和发育期组成。因此,这种生物提供了一个难得的机会来检查生物活性物质对单独细胞活性的影响。在这项研究中,我们研究了由合成微生物群落产生的培养提取物EMXG的效果。EMXG促进阿米巴细胞的增殖反应。它进一步加速了发育阶段,导致由更少的细胞形成优选的子实体。此外,EMXG调节了该生物体的生物节律,即在悬浮饥饿中观察到的cAMP水平振荡的间隔显著缩短。同时,发现ERKB(一种MAP激酶)的水平以与cAMP类似的方式振荡。此外,ErkB缺陷的突变变形虫细胞对EMXG的增殖刺激没有反应。这些证据表明MAP激酶级联可能参与其中,并且ErkB可能是EMXG的分子靶标。
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引用次数: 1
A Riboflavin Transporter in Bdellovibrio exovorous JSS 嗜食性弧菌JSS中的核黄素转运体
IF 1.2 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-09-11 DOI: 10.1159/000501354
I. Rodionova, Fereshteh Heidari Tajabadi, Zhongge Zhang, D. Rodionov, M. Saier Jr.
The ImpX transporters of the drug/metabolite transporter superfamily were first proposed to transport riboflavin (RF; vitamin B2) based on findings of a cis-regulatory RNA element responding to flavin mononucleotide (an FMN riboswitch). Bdellovibrio exovorous JSS has a homolog belonging to this superfamily. It has 10 TMSs and shows 30% identity to the previously characterized ImpX transporter from Fusobacterium nucleatum. However, the ImpX homolog is not regulated by an FMN-riboswitch. In order to test the putative function of the ImpX homolog from B. exovorous (BexImpX), we cloned and heterologously expressed its gene. We used functional complementation, growth inhibition experiments, direct uptake experiments and inhibition studies, suggesting a high degree of specificity for RF uptake. The EC50 for growth with RF was estimated to be in the range 0.5–1 µM, estimated from the half-maximal RF concentration supporting the growth of a RF auxotrophic Escherichia coli strain, but the Khalf for RF uptake was 20 µM. Transport experiments suggested that the energy source is the proton motive force but that NaCl stimulates uptake. Thus, members of the ImpX family members are capable of RF uptake, not only in RF prototrophic species such as F. nucleatum, but also in the B2 auxotrophic species, B. exovorous.
药物/代谢产物转运蛋白超家族的ImpX转运蛋白首次被提出用于转运核黄素(RF;维生素B2),这是基于对黄素单核苷酸(FMN核糖开关)有反应的顺式调节RNA元件的发现。外食Bdellovibrio JSS有一个同源物属于这个超科。它具有10个TMS,并且显示出与先前表征的来自有核梭杆菌的ImpX转运蛋白30%的同一性。然而,ImpX同源物不受FMN核糖开关的调节。为了测试来自外食B.ImpX同源物(BexImpX)的假定功能,我们克隆并异源表达了其基因。我们使用了功能互补、生长抑制实验、直接摄取实验和抑制研究,表明RF摄取具有高度特异性。RF生长的EC50估计在0.5–1µM范围内,根据支持RF营养缺陷型大肠杆菌菌株生长的最大RF浓度的一半估计,但RF吸收的狭河道为20µM。输运实验表明,能量来源是质子动力,但NaCl刺激吸收。因此,ImpX家族成员能够吸收RF,不仅在RF原营养物种(如有核F.nucleum)中,而且在B2营养缺陷型物种(B.exoovorous)中。
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引用次数: 3
Contents 内容
IF 1.2 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-07-01 DOI: 10.1159/000501813
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引用次数: 0
Front & Back Matter 正面和背面事项
IF 1.2 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-07-01 DOI: 10.1159/000502191
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引用次数: 0
Front & Back Matter 正面和背面事项
IF 1.2 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-03-01 DOI: 10.1159/000499847
W. Wiersinga, G. Kahaly, V. Blanchette, L. Brandão, V. Breakey, S. Revel-Vilk
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引用次数: 0
Studies of the Listeria monocytogenes Cellobiose Transport Components and Their Impact on Virulence Gene Repression. 单核增生李斯特菌纤维二糖转运组分及其对毒力基因抑制作用的研究。
IF 1.2 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-01-01 Epub Date: 2019-07-03 DOI: 10.1159/000500090
Thanh Nguyen Cao, Philippe Joyet, Francine Moussan Désirée Aké, Eliane Milohanic, Josef Deutscher

Background: Many bacteria transport cellobiose via a phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In Listeria monocytogenes, two pairs of soluble PTS components (EIIACel1/EIIBCel1 and EIIACel2/EIIBCel2) and the permease EIICCel1 were suggested to contribute to cellobiose uptake. Interestingly, utilization of several carbohydrates, including cellobiose, strongly represses virulence gene expression by inhibiting PrfA, the virulence gene activator.

Results: The LevR-like transcription regulator CelR activates expression of the cellobiose-induced PTS operons celB1-celC1-celA1, celB2-celA2, and the EIIC-encoding monocistronic celC2. Phosphorylation by P∼His-HPr at His550 activates CelR, whereas phosphorylation by P∼EIIBCel1 or P∼EIIBCel2 at His823 inhibits it. Replacement of His823 with Ala or deletion of both celA or celB genes caused constitutive CelR regulon expression. Mutants lacking EIICCel1, CelR or both EIIACel exhibitedslow cellobiose consumption. Deletion of celC1 or celR prevented virulence gene repression by the disaccharide, but not by glucose and fructose. Surprisingly, deletion of both celA genes caused virulence gene repression even during growth on non-repressing carbohydrates. No cellobiose-related phenotype was found for the celC2 mutant.

Conclusion: The two EIIA/BCel pairs are similarly efficient as phosphoryl donors in EIICCel1-catalyzed cellobiose transport and CelR regulation. The permanent virulence gene repression in the celA double mutant further supports a role of PTSCel components in PrfA regulation.

背景:许多细菌通过磷酸烯醇丙酮酸:碳水化合物磷酸转移酶系统(PTS)转运纤维素二糖。在单核增生李斯特菌中,两对可溶性PTS组分(EIIACel1/EIIBCel1和EIIACel2/EIIBCel2)和渗透酶EIICCel1被认为有助于纤维二糖的摄取。有趣的是,利用几种碳水化合物,包括纤维素二糖,通过抑制毒力基因激活因子PrfA,强烈抑制毒力基因的表达。结果:类水平转录调节因子CelR激活了纤维素糖诱导的PTS操纵子celB1-celC1-celA1、celB2-celA2和编码eiic的单顺反子celC2的表达。P ~ His-HPr在His550位点的磷酸化激活了CelR,而P ~ EIIBCel1或P ~ EIIBCel2在His823位点的磷酸化抑制了它。用Ala替代His823或同时缺失celA或celB基因可导致组成型CelR调控表达。缺乏EIICCel1、CelR或两者都缺乏的突变体表现出缓慢的纤维素糖消耗。celC1或celR的缺失阻止了双糖对毒力基因的抑制,而葡萄糖和果糖则不起作用。令人惊讶的是,即使在非抑制性碳水化合物的生长过程中,两种celA基因的缺失也会导致毒力基因的抑制。celC2突变体未发现纤维素二糖相关表型。结论:两个EIIA/BCel对在eiiccel1催化的纤维二糖运输和CelR调控中作为磷酸化基供体具有相似的效率。celA双突变体的永久毒力基因抑制进一步支持PTSCel成分在PrfA调控中的作用。
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引用次数: 11
Study of the Enzymatic Capacity of Kluyveromyces marxianus for the Synthesis of Esters. 马氏克鲁维菌合成酯酶能力的研究。
IF 1.2 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-01-01 Epub Date: 2020-04-23 DOI: 10.1159/000507551
Francisco Javier Reyes-Sánchez, Jesús Bernardo Páez-Lerma, Juan Antonio Rojas-Contreras, Javier López-Miranda, Nicolás Óscar Soto-Cruz, Manuel Reinhart-Kirchmayr

Recently, biotechnological opportunities have been found in non-Saccharomyces yeasts because they possess metabolic characteristics that lead to the production of compounds of interest. It has been observed that Kluyveromyces marxianus has a great potential in the production of esters, which are aromatic compounds of industrial importance. The genetic bases that govern the synthesis of esters include a large group of enzymes, among which the most important are alcohol acetyl transferases (AATases) and esterases (AEATases), and it is known that some are present in K. marxianus, because it has genetic characteristics like S. cerevisiae. It also has a physiology suitable for biotechnological use since it is the eukaryotic microorganism with the fastest growth rate and has a wide range of thermotolerance with respect to other yeasts. In this work, the enzymatic background of K. marxianus involved in the synthesis of esters is analyzed, based on the sequences reported in the NCBI database.

最近,在非酵母菌中发现了生物技术的机会,因为它们具有导致产生感兴趣的化合物的代谢特性。研究表明,马氏克鲁维菌在生产具有重要工业意义的芳香族化合物酯方面具有很大的潜力。控制酯合成的遗传碱基包括一大群酶,其中最重要的是醇乙酰转移酶(aatase)和酯酶(aeatase),已知其中一些存在于K. marxianus中,因为它具有与酿酒酵母相似的遗传特征。由于它是生长速度最快的真核微生物,并且相对于其他酵母具有广泛的耐热性,因此它也具有适合生物技术使用的生理特性。本文基于NCBI数据库中报道的序列,分析了K. marxianus参与酯类合成的酶学背景。
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引用次数: 12
Front & Back Matter 正面和背面事项
IF 1.2 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-01-01 DOI: 10.1159/000496485
W. Wiersinga, G. Kahaly, V. Blanchette, L. Brandão, V. Breakey, S. Revel-Vilk
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引用次数: 0
期刊
Journal of Molecular Microbiology and Biotechnology
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