一种动物线虫属菌株的基因组序列初稿及其基因原位表达。

Q3 Biochemistry, Genetics and Molecular Biology Standards in Genomic Sciences Pub Date : 2017-10-18 eCollection Date: 2017-01-01 DOI:10.1186/s40793-017-0274-y
Emilie E L Muller, Shaman Narayanasamy, Myriam Zeimes, Cédric C Laczny, Laura A Lebrun, Malte Herold, Nathan D Hicks, John D Gillece, James M Schupp, Paul Keim, Paul Wilmes
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引用次数: 0

摘要

从某城市污水处理厂的发泡活性污泥中新分离到革兰氏阴性β -变形杆菌Zoogloea sp. LCSB751 (LMG 29444)。在这里,我们描述了它的基因组序列草图和注释以及一般的生理和基因组分析,作为Zoogloea属的第一个测序代表。此外,Zoogloea sp.的基因表达在其环境中描述使用从同一处理厂获得的亚转录组学数据。所呈现的基因组和转录组学信息证明了该属在废水中合成聚β-羟基烷酸盐的显著能力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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First draft genome sequence of a strain belonging to the Zoogloea genus and its gene expression in situ.

The Gram-negative beta-proteobacterium Zoogloea sp. LCSB751 (LMG 29444) was newly isolated from foaming activated sludge of a municipal wastewater treatment plant. Here, we describe its draft genome sequence and annotation together with a general physiological and genomic analysis, as the first sequenced representative of the Zoogloea genus. Moreover, Zoogloea sp. gene expression in its environment is described using metatranscriptomic data obtained from the same treatment plant. The presented genomic and transcriptomic information demonstrate a pronounced capacity of this genus to synthesize poly-β-hydroxyalkanoate within wastewater.

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来源期刊
Standards in Genomic Sciences
Standards in Genomic Sciences GENETICS & HEREDITY-MICROBIOLOGY
CiteScore
1.44
自引率
0.00%
发文量
0
审稿时长
6-12 weeks
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