迁移学习视角下的金属-有机框架聚类研究

IF 3.2 3区 工程技术 Q2 CHEMISTRY, PHYSICAL Molecular Systems Design & Engineering Pub Date : 2023-04-11 DOI:10.1039/D3ME00016H
Gregory M. Cooper and Yamil J. Colón
{"title":"迁移学习视角下的金属-有机框架聚类研究","authors":"Gregory M. Cooper and Yamil J. Colón","doi":"10.1039/D3ME00016H","DOIUrl":null,"url":null,"abstract":"<p >Metal–organic frameworks (MOFs) are promising materials with various applications, and machine learning (ML) techniques can enable their design and understanding of structure–property relationships. In this paper, we use machine learning (ML) to cluster the MOFs using two different approaches. For the first set of clusters, we decompose the data using the textural properties and cluster the resulting components. We separately cluster the MOF space with respect to their topology. The feature data from each of the clusters were then fed into separate neural networks (NNs) for direct learning on an adsorption task (methane or hydrogen). The resulting NNs were then used in transfer learning (TL) where only the last NN layer was retrained. The results show significant differences in TL performance based on which cluster is chosen for direct learning. We find TL performance depends on the Euclidean distance in the decomposed feature space between the clusters involved in the direct and TL. Similar results were found when TL was performed simultaneously across both types of clusters and adsorption tasks. We note that methane adsorption was a better source task than hydrogen adsorption. Overall, the approach was able to identify MOFs with the most transferable information, leading to valuable insights and a more comprehensive understanding of the MOF landscape. This highlights the method's potential to generate a deeper understanding of complex systems and provides an opportunity for its application in alternative datasets.</p>","PeriodicalId":91,"journal":{"name":"Molecular Systems Design & Engineering","volume":" 8","pages":" 1049-1059"},"PeriodicalIF":3.2000,"publicationDate":"2023-04-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Metal–organic framework clustering through the lens of transfer learning†\",\"authors\":\"Gregory M. Cooper and Yamil J. Colón\",\"doi\":\"10.1039/D3ME00016H\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p >Metal–organic frameworks (MOFs) are promising materials with various applications, and machine learning (ML) techniques can enable their design and understanding of structure–property relationships. In this paper, we use machine learning (ML) to cluster the MOFs using two different approaches. For the first set of clusters, we decompose the data using the textural properties and cluster the resulting components. We separately cluster the MOF space with respect to their topology. The feature data from each of the clusters were then fed into separate neural networks (NNs) for direct learning on an adsorption task (methane or hydrogen). The resulting NNs were then used in transfer learning (TL) where only the last NN layer was retrained. The results show significant differences in TL performance based on which cluster is chosen for direct learning. We find TL performance depends on the Euclidean distance in the decomposed feature space between the clusters involved in the direct and TL. Similar results were found when TL was performed simultaneously across both types of clusters and adsorption tasks. We note that methane adsorption was a better source task than hydrogen adsorption. Overall, the approach was able to identify MOFs with the most transferable information, leading to valuable insights and a more comprehensive understanding of the MOF landscape. This highlights the method's potential to generate a deeper understanding of complex systems and provides an opportunity for its application in alternative datasets.</p>\",\"PeriodicalId\":91,\"journal\":{\"name\":\"Molecular Systems Design & Engineering\",\"volume\":\" 8\",\"pages\":\" 1049-1059\"},\"PeriodicalIF\":3.2000,\"publicationDate\":\"2023-04-11\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Molecular Systems Design & Engineering\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://pubs.rsc.org/en/content/articlelanding/2023/me/d3me00016h\",\"RegionNum\":3,\"RegionCategory\":\"工程技术\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"CHEMISTRY, PHYSICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Molecular Systems Design & Engineering","FirstCategoryId":"5","ListUrlMain":"https://pubs.rsc.org/en/content/articlelanding/2023/me/d3me00016h","RegionNum":3,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
引用次数: 0

摘要

金属有机框架(mof)是具有各种应用前景的材料,机器学习(ML)技术可以使其设计和理解结构-性质关系。在本文中,我们使用机器学习(ML)使用两种不同的方法对mof进行聚类。对于第一组聚类,我们使用纹理属性分解数据并将结果组件聚类。我们分别对MOF空间的拓扑结构进行聚类。然后将每个簇的特征数据输入到单独的神经网络(NNs)中,用于直接学习吸附任务(甲烷或氢气)。然后将得到的神经网络用于迁移学习(TL),其中只对最后一层神经网络进行再训练。结果表明,基于选择哪种聚类进行直接学习,在语言学习性能上存在显著差异。我们发现TL的性能取决于直接和TL所涉及的簇之间在分解特征空间中的欧几里得距离。当TL同时在两种类型的簇和吸附任务中进行时,发现了类似的结果。我们注意到甲烷吸附是比氢吸附更好的源任务。总体而言,该方法能够识别具有最可转移信息的MOF,从而获得有价值的见解,并对MOF景观有更全面的了解。这突出了该方法对复杂系统产生更深层次理解的潜力,并为其在替代数据集中的应用提供了机会。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

摘要图片

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Metal–organic framework clustering through the lens of transfer learning†

Metal–organic frameworks (MOFs) are promising materials with various applications, and machine learning (ML) techniques can enable their design and understanding of structure–property relationships. In this paper, we use machine learning (ML) to cluster the MOFs using two different approaches. For the first set of clusters, we decompose the data using the textural properties and cluster the resulting components. We separately cluster the MOF space with respect to their topology. The feature data from each of the clusters were then fed into separate neural networks (NNs) for direct learning on an adsorption task (methane or hydrogen). The resulting NNs were then used in transfer learning (TL) where only the last NN layer was retrained. The results show significant differences in TL performance based on which cluster is chosen for direct learning. We find TL performance depends on the Euclidean distance in the decomposed feature space between the clusters involved in the direct and TL. Similar results were found when TL was performed simultaneously across both types of clusters and adsorption tasks. We note that methane adsorption was a better source task than hydrogen adsorption. Overall, the approach was able to identify MOFs with the most transferable information, leading to valuable insights and a more comprehensive understanding of the MOF landscape. This highlights the method's potential to generate a deeper understanding of complex systems and provides an opportunity for its application in alternative datasets.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Molecular Systems Design & Engineering
Molecular Systems Design & Engineering Engineering-Biomedical Engineering
CiteScore
6.40
自引率
2.80%
发文量
144
期刊介绍: Molecular Systems Design & Engineering provides a hub for cutting-edge research into how understanding of molecular properties, behaviour and interactions can be used to design and assemble better materials, systems, and processes to achieve specific functions. These may have applications of technological significance and help address global challenges.
期刊最新文献
Back cover Back cover Molecular design of protein-based materials – state of the art, opportunities and challenges at the interface between materials engineering and synthetic biology Multi-site esterification: a tunable, reversible strategy to tailor therapeutic peptides for delivery Controlling the Photochromism of Zirconium Pyromellitic Diimide-Based Metal-Organic Frameworks through Coordinating Solvents
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1