基于 ITRAQ 的定量蛋白质组分析用于降低肠道毒性的加工酢浆草。

IF 2.1 3区 生物学 Q3 BIOCHEMICAL RESEARCH METHODS Proteome Science Pub Date : 2018-04-17 eCollection Date: 2018-01-01 DOI:10.1186/s12953-018-0136-6
Yu Zhang, Yingzi Wang, Shaojing Li, Xiuting Zhang, Wenhua Li, Shengxiu Luo, Zhenyang Sun, Ruijie Nie
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引用次数: 0

摘要

背景:泽泻是一种中药,常用于治疗水肿、腹水、便秘、闭经和疥疮。菟丝子是中医常用的另一种菟丝子,是通过去除种子中的油脂(称为 "菟丝子油")而获得的,具有缓解腹泻的作用。但其减轻肠道毒性的机制尚未得到明确研究:本研究采用相对和绝对定量异位标签(iTRAQ)结合液相色谱-串联质谱(LC-MS/MS)的蛋白质组学方法,研究大叶女贞对参与肠道代谢的蛋白质表达的影响,以说明大叶女贞的潜在减毒机制。研究鉴定了大戟提取物(SE)、大戟提取物(SEP)和大戟因子1(EFL1)处理后肠道中的差异表达蛋白(DEPs)。生物信息学分析包括GO分析、通路分析和网络分析,通过蛋白质网络分析腹泻衰减机制的关键代谢通路。此外,还对所选蛋白及相关通路进行了Western印迹验证:结果:发现了一些可能与肠道炎症相关的差异表达蛋白。它们主要由细胞的一部分构成。它们的表达位点位于细胞和细胞器内。G蛋白和Eph/Ephrin信号通路由SEP和SE共同控制。经过处理后,SEP的提取主要反映在细胞骨架、糖酵解和糖元生成过程中:这些研究结果表明,SEP可诱导炎症反应,并激活白细胞介素信号通路,如Ang/Tie 2和JAK2/ STAT信号通路,最终可能导致肠道炎症损伤,而SEP可通过下调STAT1和激活Ang-4减轻炎症反应,从而缓解这种损伤。我们的研究结果表明了 Ang-4 和 STAT1 表达的重要性,它们是基于蛋白质组学研究的 SEP 处理后减轻损伤的靶蛋白。因此,iTRAQ 可能是一种新的候选方法,可用于研究处理后的 SE 减毒剂从细胞水平表达较低毒性这一假设的科学内涵。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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ITRAQ-based quantitative proteomic analysis of processed Euphorbia lathyris L. for reducing the intestinal toxicity.

Background: Euphorbia lathyris L., a Traditional Chinese medicine (TCM), is commonly used for the treatment of hydropsy, ascites, constipation, amenorrhea, and scabies. Semen Euphorbiae Pulveratum, which is another type of Euphorbia lathyris that is commonly used in TCM practice and is obtained by removing the oil from the seed that is called paozhi, has been known to ease diarrhea. Whereas, the mechanisms of reducing intestinal toxicity have not been clearly investigated yet.

Methods: In this study, the isobaric tags for relative and absolute quantitation (iTRAQ) in combination with the liquid chromatography-tandem mass spectrometry (LC-MS/MS) proteomic method was applied to investigate the effects of Euphorbia lathyris L. on the protein expression involved in intestinal metabolism, in order to illustrate the potential attenuated mechanism of Euphorbia lathyris L. processing. Differentially expressed proteins (DEPs) in the intestine after treated with Semen Euphorbiae (SE), Semen Euphorbiae Pulveratum (SEP) and Euphorbiae Factor 1 (EFL1) were identified. The bioinformatics analysis including GO analysis, pathway analysis, and network analysis were done to analyze the key metabolic pathways underlying the attenuation mechanism through protein network in diarrhea. Western blot were performed to validate selected protein and the related pathways.

Results: A number of differentially expressed proteins that may be associated with intestinal inflammation were identified. They mainly constituted by part of the cell. The expression sites of them located within cells and organelles. G protein and Eph/Ephrin signal pathway were controlled jointly by SEP and SE. After processing, the extraction of SEP were mainly reflected in the process of cytoskeleton, glycolysis and gluconeogenesis.

Conclusions: These findings suggest that SE induced an inflammatory response, and activated the Interleukin signaling pathway, such as the Ang/Tie 2 and JAK2/ STAT signaling pathways, which may eventually contribute to injury result from intestinal inflammatory, while SEP could alleviate this injury by down-regulating STAT1 and activating Ang-4 that might reduce the inflammatory response. Our results demonstrated the importance of Ang-4 and STAT1 expression, which are the target proteins in the attenuated of SE after processing based on proteomic investigation. Thus iTRAQ might be a novel candidate method to study scientific connotation of hypothesis that the attenuated of SE after processing expressed lower toxicity from cellular levels.

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来源期刊
Proteome Science
Proteome Science 生物-生化研究方法
CiteScore
2.90
自引率
0.00%
发文量
17
审稿时长
4.5 months
期刊介绍: Proteome Science is an open access journal publishing research in the area of systems studies. Proteome Science considers manuscripts based on all aspects of functional and structural proteomics, genomics, metabolomics, systems analysis and metabiome analysis. It encourages the submissions of studies that use large-scale or systems analysis of biomolecules in a cellular, organismal and/or environmental context. Studies that describe novel biological or clinical insights as well as methods-focused studies that describe novel methods for the large-scale study of any and all biomolecules in cells and tissues, such as mass spectrometry, protein and nucleic acid microarrays, genomics, next-generation sequencing and computational algorithms and methods are all within the scope of Proteome Science, as are electron topography, structural methods, proteogenomics, chemical proteomics, stem cell proteomics, organelle proteomics, plant and microbial proteomics. In spite of its name, Proteome Science considers all aspects of large-scale and systems studies because ultimately any mechanism that results in genomic and metabolomic changes will affect or be affected by the proteome. To reflect this intrinsic relationship of biological systems, Proteome Science will consider all such articles.
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