广西龙虎山野生恒河猴病毒的宏基因组分析

Wenbin Liu, Cuiyuan Zhang, Jiemei Yu, Lili Li, Yuanyun Ao, Zhaojun Duan
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引用次数: 0

摘要

在非人类灵长类动物中发现了几种病毒,其中一些对人类具有致病性。为了进一步表征野生恒河猴中存在的病毒谱,使用MiSeq高通量测序分析了从中国广西收集的280份粪便样本。共获得23,372,679条reads,其中4,641条注释到27个病毒科或亚科,包括5个脊椎动物病毒科(78.2%)、6个昆虫病毒科(5.5%)、11个植物病毒科(10.4%)和其他病毒科(9.8%)。进一步的分析表明,这些序列与已知的病毒具有高度的相似性,最适合于萨珀病毒、肠道病毒、细小病毒、腺相关病毒。然而,一些reads与这些病毒存在明显差异。此外,PCR扩增证实了这些潜在的新型病毒。本研究探索了广西地区恒河猴粪便的病毒谱,为这些病毒的潜在公共卫生意义奠定了基础。
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[Metagenomic Analysis of Wild Rhesus Monkey Virome in Longhu Mountain in Guangxi Area, China].

Several viruses have been found in non-human primates, among which some are pathogenic to humans. To further characterize the spectrum of viruses present in wild rhesus monkeys, MiSeq high-throughput sequencing were used to analyze 280 fecal samples collected from Guangxi, China. A total of 23,372,679 reads were obtained, of which 4,641 were annotated to 27 viral families or subfamilies, including five vertebrate viruses families(78.2%),six insect virus families(5.5%),eleven plant virus families(10.4%),and other viruses(9.8%).Further analysis revealed that these reads best fit with the sapelovirus, enterovirus, parvovirus, adeno-associated virus read sequences shared a high similarity with the known viruses. However, some reads presented obvious differences from these viruses. Moreover, PCR amplification was conducted to confirm these potentially novel viruses. This study had explored the viral spectrum of rhesus monkey feces in the Guangxi area, which laid the foundation for the potential public health significance of these viruses.

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