[中国云南分离的疫苗衍生脊髓灰质炎病毒的全基因组特征]。

Jingiing Tang, Jie Zhang, Kai Li, Bingjun Tian, Zhixian Zhao, Zhengrong Ding
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摘要

为探讨2010年和2012年云南省2例急性弛缓性麻痹(AFP)病例分离的4株疫苗衍生脊髓灰质炎病毒(VDPV)的基因组特征,测定了4株疫苗衍生脊髓灰质炎病毒(VDPV)全基因组序列。序列分析显示,Ⅱ型和Ⅰ型VDPV的全基因组长度分别为7439nt和7441nt。与Sabin菌株相比,II型VDPV的核苷酸和氨基酸序列相似性分别为95.4%和97.7%,I型VDPV的核苷酸和氨基酸序列相似性分别为93.9%和97.9%。在Ⅱ型VDPV的两个重要衰减位点(nt481和nt)和I型VDPV的三个重要衰减位点(nt480、nt2795和nt6203)上发现核苷酸取代。2型和1型vdpv与Sabin株差异分别为1.0%和2.3%。相似图分析显示,4个菌株的基因组存在多个重组事件,表明重组具有普遍性和复杂性。在分子水平上分析VDPV的特征,可以提供有价值的进化动力学信息,为制定科学可行的VDPV控制策略奠定基础。
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[Complete Genome Characterization of Vaccine-derived Polioviruses Isolated in Yunnan,China].

To explore the genomic characterization of 4vaccine-derived poliovirus(VDPV)strains isolated from 2acute flaccid paralysis(AFP)cases in Yunnan Province in 2010 and 2012,respectively,the complete genome sequences of the 4strains were determined. Sequence analysis revealed that the complete genome length of the type Ⅱ and type Ⅰ VDPV was 7439nt and 7441 nt, respectively. Nucleotide and amino acid sequence similarities of type II VDPV were 95.4% and 97.7%,respectively,and type I VDPV were93.9% and 97.9%,respectively as compared with those of Sabin strains. Nucleotide substitutions were found at two important attenuation sites (nt 481 and nt in type Ⅱ VDPV, and three important attenuation sites(nt480,nt2795 and nt6203)in type I VDPV. Type 2 and type 1VDPV strains had 1.0% and2.3% divergence with Sabin strains, respectively. Similarity plot analysis showed multiple recombination events in the genome of the 4strains,which showed that the recombination was common and complex. Analysis of the characteristics of VDPVs on molecular level could provide valuable information on evolutionary dynamics and lay foundation for developing scientific and feasible strategy to control VDPV.

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