U. Damm , T. Sato , A. Alizadeh , J.Z. Groenewald , P.W. Crous
{"title":"炭疽菌、炭疽菌和兰科炭疽菌的种复合体","authors":"U. Damm , T. Sato , A. Alizadeh , J.Z. Groenewald , P.W. Crous","doi":"10.1016/j.simyco.2018.04.001","DOIUrl":null,"url":null,"abstract":"<div><p>Although <em>Glomerella glycines</em>, <em>Colletotrichum magnum</em> and <em>C. orchidearum</em> are known as causal agents of anthracnose of soybean, <em>Cucurbitaceae</em> and <em>Orchidaceae</em>, respectively, their taxonomy remains unresolved. In preliminary analyses based on ITS, strains of these species appear basal in <em>Colletotrichum</em> phylogenies, clustering close to <em>C. cliviae</em>, <em>C. brevisporum</em> and other recently described species from tropical or subtropical regions. Phylogenetic analyses (ITS, <em>GAPDH</em>, <em>CHS-1, HIS3, ACT, TUB2</em>) of 102 strains previously identified as <em>Ga. glycines</em>, <em>C. magnum</em> and <em>C. orchidearum</em> as well as other related strains from different culture collections and studies placed these taxa in three species complexes, and distinguished at least 24 species, including 11 new species. In this study, <em>C. magnum</em>, <em>C. orchidearum</em> and <em>C. piperis</em> were epitypified and their taxonomy resolved, while <em>C. cliviicola</em> was proposed as a new name for <em>C. cliviae</em>. Furthermore, a sexual morph was observed for <em>C. yunnanense</em>, while <em>C. brevisporum</em>, <em>C. cliviicola</em> and <em>C. tropicicola</em> were reported from new hosts or countries. Regarding their conidial morphology, species in the <em>C. dracaenophilum, C. magnum</em> and <em>C. orchidearum</em> species complexes are reminiscent of <em>C. gloeosporioides</em> or <em>C. boninense</em> s. lat., and were likely to be confused with them in the past.</p></div>","PeriodicalId":22036,"journal":{"name":"Studies in Mycology","volume":"92 ","pages":"Pages 1-46"},"PeriodicalIF":14.1000,"publicationDate":"2019-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.simyco.2018.04.001","citationCount":"126","resultStr":"{\"title\":\"The Colletotrichum dracaenophilum, C. magnum and C. orchidearum species complexes\",\"authors\":\"U. Damm , T. Sato , A. Alizadeh , J.Z. Groenewald , P.W. Crous\",\"doi\":\"10.1016/j.simyco.2018.04.001\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>Although <em>Glomerella glycines</em>, <em>Colletotrichum magnum</em> and <em>C. orchidearum</em> are known as causal agents of anthracnose of soybean, <em>Cucurbitaceae</em> and <em>Orchidaceae</em>, respectively, their taxonomy remains unresolved. In preliminary analyses based on ITS, strains of these species appear basal in <em>Colletotrichum</em> phylogenies, clustering close to <em>C. cliviae</em>, <em>C. brevisporum</em> and other recently described species from tropical or subtropical regions. Phylogenetic analyses (ITS, <em>GAPDH</em>, <em>CHS-1, HIS3, ACT, TUB2</em>) of 102 strains previously identified as <em>Ga. glycines</em>, <em>C. magnum</em> and <em>C. orchidearum</em> as well as other related strains from different culture collections and studies placed these taxa in three species complexes, and distinguished at least 24 species, including 11 new species. In this study, <em>C. magnum</em>, <em>C. orchidearum</em> and <em>C. piperis</em> were epitypified and their taxonomy resolved, while <em>C. cliviicola</em> was proposed as a new name for <em>C. cliviae</em>. Furthermore, a sexual morph was observed for <em>C. yunnanense</em>, while <em>C. brevisporum</em>, <em>C. cliviicola</em> and <em>C. tropicicola</em> were reported from new hosts or countries. Regarding their conidial morphology, species in the <em>C. dracaenophilum, C. magnum</em> and <em>C. orchidearum</em> species complexes are reminiscent of <em>C. gloeosporioides</em> or <em>C. boninense</em> s. lat., and were likely to be confused with them in the past.</p></div>\",\"PeriodicalId\":22036,\"journal\":{\"name\":\"Studies in Mycology\",\"volume\":\"92 \",\"pages\":\"Pages 1-46\"},\"PeriodicalIF\":14.1000,\"publicationDate\":\"2019-03-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://sci-hub-pdf.com/10.1016/j.simyco.2018.04.001\",\"citationCount\":\"126\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Studies in Mycology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0166061618300101\",\"RegionNum\":1,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"MYCOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Studies in Mycology","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0166061618300101","RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"MYCOLOGY","Score":null,"Total":0}
The Colletotrichum dracaenophilum, C. magnum and C. orchidearum species complexes
Although Glomerella glycines, Colletotrichum magnum and C. orchidearum are known as causal agents of anthracnose of soybean, Cucurbitaceae and Orchidaceae, respectively, their taxonomy remains unresolved. In preliminary analyses based on ITS, strains of these species appear basal in Colletotrichum phylogenies, clustering close to C. cliviae, C. brevisporum and other recently described species from tropical or subtropical regions. Phylogenetic analyses (ITS, GAPDH, CHS-1, HIS3, ACT, TUB2) of 102 strains previously identified as Ga. glycines, C. magnum and C. orchidearum as well as other related strains from different culture collections and studies placed these taxa in three species complexes, and distinguished at least 24 species, including 11 new species. In this study, C. magnum, C. orchidearum and C. piperis were epitypified and their taxonomy resolved, while C. cliviicola was proposed as a new name for C. cliviae. Furthermore, a sexual morph was observed for C. yunnanense, while C. brevisporum, C. cliviicola and C. tropicicola were reported from new hosts or countries. Regarding their conidial morphology, species in the C. dracaenophilum, C. magnum and C. orchidearum species complexes are reminiscent of C. gloeosporioides or C. boninense s. lat., and were likely to be confused with them in the past.
期刊介绍:
The international journal Studies in Mycology focuses on advancing the understanding of filamentous fungi, yeasts, and various aspects of mycology. It publishes comprehensive systematic monographs as well as topical issues covering a wide range of subjects including biotechnology, ecology, molecular biology, pathology, and systematics. This Open-Access journal offers unrestricted access to its content.
Each issue of Studies in Mycology consists of around 5 to 6 papers, either in the form of monographs or special focused topics. Unlike traditional length restrictions, the journal encourages submissions of manuscripts with a minimum of 50 A4 pages in print. This ensures a thorough exploration and presentation of the research findings, maximizing the depth of the published work.