海洋无脊椎动物保护基因组学的多个方面。

IF 8.7 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Annual Review of Animal Biosciences Pub Date : 2019-02-15 Epub Date: 2018-11-28 DOI:10.1146/annurev-animal-020518-115034
Jose V Lopez, Bishoy Kamel, Mónica Medina, Timothy Collins, Iliana B Baums
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引用次数: 13

摘要

保护基因组学旨在保护种群的生存能力和生物体的生物多样性。无脊椎生物占动物生物多样性的95%;然而,目前存在的基因组资源很少。海洋无脊椎动物的子集包括最古老的后生动物谱系,拥有独特的基因产物编码和可能的适应关键。支持无脊椎动物保护基因组学研究的好处(例如,可能发现新基因,蛋白质调节机制,基因组创新和转座元件)超过了各种障碍(稀有,小或多态性起始材料)。在这里,我们回顾了在实验室和计算机中应用于海洋无脊椎动物的最佳保护基因组学实践,并展示了几个关于acroporid珊瑚、棘冠海星、苹果螺和鲍鱼的案例研究的独特特征。海洋保护基因组学还应解决多样性如何导致独特的海洋创新、有害变异的影响以及基因组监测和分析如何对更广泛的保护目标产生积极影响(例如,原位/非原位基因组种群基线数据的价值)。
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Multiple Facets of Marine Invertebrate Conservation Genomics.

Conservation genomics aims to preserve the viability of populations and the biodiversity of living organisms. Invertebrate organisms represent 95% of animal biodiversity; however, few genomic resources currently exist for the group. The subset of marine invertebrates includes the most ancient metazoan lineages and possesses codes for unique gene products and possible keys to adaptation. The benefits of supporting invertebrate conservation genomics research (e.g., likely discovery of novel genes, protein regulatory mechanisms, genomic innovations, and transposable elements) outweigh the various hurdles (rare, small, or polymorphic starting materials). Here we review best conservation genomics practices in the laboratory and in silico when applied to marine invertebrates and also showcase unique features in several case studies of acroporid corals, crown-of-thorns starfish, apple snails, and abalone. Marine conservation genomics should also address how diversity can lead to unique marine innovations, the impact of deleterious variation, and how genomic monitoring and profiling could positively affect broader conservation goals (e.g., value of baseline data for in situ/ex situ genomic stocks).

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来源期刊
Annual Review of Animal Biosciences
Annual Review of Animal Biosciences BIOTECHNOLOGY & APPLIED MICROBIOLOGY-ZOOLOGY
CiteScore
21.30
自引率
0.80%
发文量
31
期刊介绍: The Annual Review of Animal Biosciences is primarily dedicated to the fields of biotechnology, genetics, genomics, and breeding, with a special focus on veterinary medicine. This includes veterinary pathobiology, infectious diseases and vaccine development, and conservation and zoo biology. The publication aims to address the needs of scientists studying both wild and domesticated animal species, veterinarians, conservation biologists, and geneticists.
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