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The Geometric Framework for Nutrition and Its Application to Rodent Models. 营养几何框架及其在啮齿动物模型中的应用。
IF 8.7 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2025-02-01 Epub Date: 2024-11-15 DOI: 10.1146/annurev-animal-111523-102327
Alistair M Senior, David Raubenheimer, David G Le Couteur, Stephen J Simpson

Rodents have been the primary model for mammalian nutritional physiology for decades. Despite an extensive body of literature, controversies remain around the effects of specific nutrients and total energy intake on several aspects of nutritional biology, even in this well-studied model. One approach that is helping to bring clarity to the field is the geometric framework for nutrition (GFN). The GFN is a multidimensional paradigm that can be used to conceptualize nutrition and nutritional effects, design experiments, and interpret results. To date, more than 30 publications have applied the GFN to data from rodent models of nutrition. Here we review the major conclusions from these studies. We pay particular attention to the effects of macronutrients on satiety, glucose metabolism, lifespan and the biology of aging, reproductive function, immune function, and the microbiome. We finish by highlighting several knowledge gaps that became evident upon reviewing this literature.

几十年来,啮齿动物一直是哺乳动物营养生理学的主要模型。尽管有大量的文献,但围绕特定营养素和总能量摄入对营养生物学多个方面的影响仍存在争议,即使在这个研究得很好的模型中也是如此。营养几何框架(GFN)是一种有助于澄清这一领域的方法。GFN 是一种多维范式,可用于营养和营养效应的概念化、实验设计和结果解释。迄今为止,已有 30 多篇论文将 GFN 应用于啮齿动物营养模型的数据。在此,我们回顾了这些研究的主要结论。我们将特别关注宏量营养素对饱腹感、糖代谢、寿命和衰老生物学、生殖功能、免疫功能和微生物组的影响。最后,我们强调了在回顾这些文献时发现的几个知识空白。
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引用次数: 0
Pregnancy Establishment and Diagnosis in Livestock. 家畜的妊娠确定和诊断。
IF 8.7 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2025-02-01 Epub Date: 2024-08-21 DOI: 10.1146/annurev-animal-021022-032214
Troy L Ott, Ahmed Tibary, Muhammad Waqas, Rodney Geisert, Julio Giordano

This comprehensive review explores the complex processes of reproduction, pregnancy establishment, and pregnancy diagnostic methods in cattle, sheep, goats, swine, horses, and camelids. It provides an overview of the history of pregnancy detection and an in-depth exploration of the physiology of pregnancy in livestock. The detection of conceptus tissue and fluids, conceptus-produced hormones, and maternal responses to conceptus signals, crucial for pregnancy diagnosis, are also discussed in detail, as are emerging methods for pregnancy diagnosis in livestock species. Overall, this review emphasizes the direct impact of pregnancy diagnosis and efficient pregnancy management for profitability of livestock enterprises.

这本综合综述探讨了牛、绵羊、山羊、猪、马和骆驼的繁殖、妊娠建立和妊娠诊断方法的复杂过程。它概述了妊娠检测的历史,并深入探讨了家畜的妊娠生理。此外,还详细讨论了对妊娠诊断至关重要的受孕组织和体液检测、受孕产生的激素以及母体对受孕信号的反应,以及家畜妊娠诊断的新兴方法。总之,本综述强调了妊娠诊断和高效妊娠管理对畜牧企业盈利能力的直接影响。
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引用次数: 0
Evolution of 3D Chromatin Folding. 三维染色质折叠的进化。
IF 8.7 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2025-02-01 Epub Date: 2024-11-12 DOI: 10.1146/annurev-animal-111523-102233
Lucía Álvarez-González, Aurora Ruiz-Herrera

Studies examining the evolution of genomes have focused mainly on sequence conservation. However, the inner working of a cell implies tightly regulated crosstalk between complex gene networks controlled by small dispersed regulatory elements of physically contacting DNA regions. How these different levels of chromatin organization crosstalk in different species underpins the potential for genome evolutionary plasticity. We review the evolution of chromatin organization across the Animal Tree of Life. We introduce general aspects of the mode and tempo of genome evolution to later explore the multiple layers of genome organization. We argue that both genome and chromosome size modulate patterns of chromatin folding and that chromatin interactions facilitate the formation of lineage-specific chromosomal reorganizations, especially in germ cells. Overall, analyzing the mechanistic forces involved in the maintenance of chromatin structure and function of the germ line is critical for understanding genome evolution, maintenance, and inheritance.

对基因组进化的研究主要集中在序列保护方面。然而,细胞的内部运作意味着复杂的基因网络之间存在紧密调节的串扰,而这些串扰是由物理上相互接触的 DNA 区域中分散的小调控元件控制的。这些不同层次的染色质组织如何在不同物种中相互影响,是基因组进化可塑性潜力的基础。我们回顾了整个动物生命树中染色质组织的进化。我们介绍了基因组进化模式和节奏的一般方面,随后探讨了基因组组织的多个层次。我们认为,基因组和染色体的大小都会调节染色质的折叠模式,染色质的相互作用会促进特定世系染色体重组的形成,尤其是在生殖细胞中。总之,分析种系染色质结构和功能的维持所涉及的机理力量对于理解基因组进化、维持和遗传至关重要。
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引用次数: 0
The Rhesus Macaque as an Animal Model for Human Nutrition: An Ecological-Evolutionary Perspective. 作为人类营养动物模型的猕猴:生态进化的视角。
IF 8.7 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2025-02-01 Epub Date: 2024-11-18 DOI: 10.1146/annurev-animal-111523-102354
Zhenwei Cui, Yunlong Dong, Jonathan Sholl, Jiqi Lu, David Raubenheimer

Nutrition is a complex and contested area in biomedicine, which requires diverse evidence sources. Nonhuman primate models are considered an important biomedical research tool because of their biological similarities to humans, but they are typically used with little explicit consideration of their ecology and evolution. Using the rhesus macaque (RM), we consider the potential of nutritional ecology for enriching the use of primates as models for human nutrition. We introduce some relevant aspects of RM evolutionary and social ecology and discuss two examples where they have been used in biomedical research: obesity and aging. We next consider how insights from nutritional ecology can help inform and direct the use of RM as a biomedical model. We conclude by illustrating how conceptual tools might inform the use of RM as a model for human nutrition and extracting insights from RM that might be relevant to broader theoretical considerations around animal model systems.

营养是生物医学中一个复杂而有争议的领域,需要多种证据来源。非人灵长类动物模型因其与人类在生物学上的相似性而被认为是重要的生物医学研究工具,但它们在使用时通常很少明确考虑其生态学和进化。利用猕猴,我们考虑了营养生态学在丰富灵长类动物作为人类营养模型的使用方面的潜力。我们介绍了猕猴进化和社会生态学的一些相关方面,并讨论了猕猴用于生物医学研究的两个例子:肥胖和衰老。接下来,我们将考虑营养生态学的见解如何有助于为将马羚用作生物医学模型提供信息和指导。最后,我们将说明概念工具如何为将 RM 用作人类营养模型提供信息,并从 RM 中提取可能与围绕动物模型系统的更广泛理论考虑相关的见解。
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引用次数: 0
Translational Relevance and Future Integration of the Oncopig Cancer Model in Preclinical Applications. Oncopig 癌症模型在临床前应用中的转化意义和未来整合。
IF 8.7 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2025-02-01 Epub Date: 2024-10-17 DOI: 10.1146/annurev-animal-111523-102125
Lobna Elkhadragy, Ron C Gaba, Matthew M Niemeyer, Lawrence B Schook, Kyle M Schachtschneider

Porcine cancer models offer a valuable platform for evaluating interventions such as devices, surgeries, and locoregional therapies, which are often challenging to test in mouse models. In addition to size and anatomical similarities with humans, pigs share greater similarities in genetics, immunity, drug metabolism, and metabolic rate with humans as compared to mouse models, increasing their translational relevance. This review focuses on the Oncopig Cancer Model, a genetically engineered porcine model designed to recapitulate human cancer. Harboring a transgenic cassette that expresses oncogenic mutant KRAS and TP53 under control of a Cre-Lox system, the Oncopig allows temporal and spatial control of tumor induction. Its versatility has enabled the development of diverse cancer models including liver, pancreatic, lung, and bladder cancer. Serving as a clinically relevant model for human cancer, the Oncopig addresses unmet clinical needs and holds immense promise for advancing preclinical cancer research and therapeutic development.

猪癌症模型为评估装置、手术和局部治疗等干预措施提供了一个宝贵的平台,而在小鼠模型中测试这些措施往往具有挑战性。与小鼠模型相比,猪除了体型和解剖结构与人类相似外,在遗传、免疫、药物代谢和新陈代谢率方面也与人类有更大的相似性,从而提高了其转化相关性。本综述重点介绍 Oncopig 癌症模型,这是一种旨在再现人类癌症的基因工程猪模型。Oncopig 携带一个转基因盒,在 Cre-Lox 系统控制下表达致癌突变体 KRAS 和 TP53,可在时间和空间上控制肿瘤诱导。它的多功能性使人们能够开发出多种癌症模型,包括肝癌、胰腺癌、肺癌和膀胱癌。作为一种与临床相关的人类癌症模型,Oncopig 解决了尚未得到满足的临床需求,在推进临床前癌症研究和治疗开发方面前景广阔。
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引用次数: 0
Convergent Evolution of Pregnancy in Vertebrates. 脊椎动物妊娠的趋同进化。
IF 8.7 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2025-02-01 Epub Date: 2024-11-15 DOI: 10.1146/annurev-animal-111523-102029
Camilla M Whittington, Mitchell J Hodgson, Christopher R Friesen

Viviparity (live birth) represents a significant evolutionary innovation that has emerged in hundreds of lineages of invertebrate and vertebrate animals. The evolution of this trait from the ancestral state of egg laying has involved complex morphological, behavioral, physiological, and genetic changes, which enable internal development of embryos within the female reproductive tract. Comparable changes have also occurred in oviparous, brooding species that carry developing embryos in locations other than the female reproductive tract. This review explores the taxonomic distribution of vertebrate viviparity and brooding (collectively termed pregnancy), discusses the adaptations associated with internal incubation, and examines hypotheses surrounding the evolution of pregnancy in different lineages. Understanding the mechanisms that have led to the emergence of this trait can illuminate questions about the evolution of reproductive complexity and the processes that led to the emergence of evolutionary innovations that have shaped the remarkable diversity of Earth's fauna.

胎生(活产)是无脊椎动物和脊椎动物数百个品系中出现的重大进化创新。从产卵的祖先状态演化而来的这一特征涉及复杂的形态、行为、生理和遗传变化,使胚胎能够在雌性生殖道内发育。卵生、育雏物种也发生了类似的变化,它们在雌性生殖道以外的地方携带发育中的胚胎。这篇综述探讨了脊椎动物胎生和雏育(统称为妊娠)在分类学上的分布,讨论了与体内孵化相关的适应性,并研究了围绕不同种系妊娠进化的假说。了解导致这一特征出现的机制,可以揭示有关生殖复杂性进化的问题,以及导致进化创新出现的过程,这些进化创新塑造了地球动物群的非凡多样性。
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引用次数: 0
Introduction.
IF 8.7 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2025-02-01 DOI: 10.1146/annurev-av-13-121824-100001
Harris Lewin, R Michael Roberts
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引用次数: 0
Integrated Genomic Approaches to Characterize and Mitigate Heat Stress in Poultry. 表征和缓解家禽热应激的综合基因组方法。
IF 8.7 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2025-02-01 Epub Date: 2024-10-30 DOI: 10.1146/annurev-animal-111523-102021
Carl J Schmidt, Susan J Lamont

With the burgeoning human population, climate change, and expansion of poultry production in hot climates, it is imperative to aid global food security by enhancing the resilience of thermally challenged poultry. As a complement to management approaches used to mitigate heat stress, we give selected examples of recent studies on heat stress in poultry using various omics technologies. An integrated analysis of positional and functional candidate genes is provided, highlighting the most prominent pathways involved in the heat stress response. We finish by discussing efficient strategies to enhance thermal tolerance of poultry by genomics approaches, advocating for preservation of biodiversity that may provide beneficial allelic variation, and identifying current and future challenges in producing climate-resilient poultry.

随着人类人口的激增、气候变化以及家禽生产在炎热气候条件下的扩展,当务之急是通过提高家禽对热应激的适应能力来帮助实现全球粮食安全。作为对用于缓解热应激的管理方法的补充,我们列举了近期利用各种全局组学技术对家禽热应激进行研究的一些实例。我们对候选基因的位置和功能进行了综合分析,突出了热应激反应中最重要的途径。最后,我们讨论了通过基因组学方法提高家禽热耐受性的有效策略,提倡保护可能提供有益等位基因变异的生物多样性,并明确了当前和未来生产气候适应性家禽所面临的挑战。
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引用次数: 0
Lipotoxicity and Oocyte Quality in Mammals: Pathogenesis, Consequences, and Reversibility. 哺乳动物的脂肪毒性和卵母细胞质量:发病机制、后果和可逆性
IF 8.7 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2025-02-01 Epub Date: 2024-11-20 DOI: 10.1146/annurev-animal-111523-102249
Ben Meulders, Waleed F A Marei, Lien Loier, Jo L M R Leroy

Metabolic stress conditions are often characterized by upregulated lipolysis and subsequently increased serum free fatty acid (FFA) concentrations, leading to the uptake of FFAs by non-adipose tissues and impairment of their function. This phenomenon is known as lipotoxicity. The increased serum FFA concentrations are reflected in the ovarian follicular fluid, which can have harmful effects on oocyte development. Several studies using in vitro and in vivo mammalian models showed that altered oocyte metabolism, increased oxidative stress, and mitochondrial dysfunction are crucial mechanisms underlying this detrimental impact. Ultimately, this can impair offspring health through the persistence of defective mitochondria in the embryo, hampering epigenetic reprogramming and early development. In vitro and in vivo treatments to enhance oocyte mitochondrial function are increasingly being developed. This can help to improve pregnancy rates and safeguard offspring health in metabolically compromised individuals.

代谢应激状态的特点通常是脂肪分解过程加快,血清游离脂肪酸(FFA)浓度随之升高,导致非脂肪组织吸收 FFAs 并损害其功能。这种现象被称为脂肪毒性。血清中饱和脂肪酸浓度的增加反映在卵泡液中,会对卵母细胞的发育产生有害影响。利用体外和体内哺乳动物模型进行的多项研究表明,卵母细胞代谢改变、氧化应激增加和线粒体功能障碍是造成这种有害影响的关键机制。最终,这会通过有缺陷线粒体在胚胎中的持续存在损害后代的健康,阻碍表观遗传重编程和早期发育。增强卵母细胞线粒体功能的体外和体内治疗方法正得到越来越多的开发。这有助于提高代谢受损个体的妊娠率,保障后代健康。
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引用次数: 0
A Passion for Small Things and Staying Primed: My Career in Virology and Immunology. 热衷小事,保持活力:我在病毒学和免疫学领域的职业生涯。
IF 8.7 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2025-02-01 Epub Date: 2024-11-15 DOI: 10.1146/annurev-animal-111523-101937
Linda J Saif

A love of science and animals, perseverance, and happenstance propelled my career in veterinary virology and immunology. I have focused on deadly enteric and respiratory viral infections in neonatal livestock and humans with an aim to understand their prevalence, pathogenesis, interspecies transmission, and immunity and develop vaccines. Research on animal coronaviruses (CoVs), including their broad interspecies transmission, provided a foundation to understand emerging zoonotic fatal human respiratory CoVs [severe acute respiratory syndrome, Middle East respiratory syndrome, severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2)] and reverse zoonosis of SARS-CoV-2 to animals. A highlight of my early research was the discovery of the gut-mammary gland-sIgA axis, documenting a common mucosal immune system. The latter remains pivotal to designing maternal vaccines for passive immunity in neonates. Our discovery and innovative cell propagation of fastidious human and animal rotaviruses and caliciviruses and their infectivity in germ-free animals has provided cell-adapted and animal disease models for ongoing virologic and immunologic investigations and vaccines. Nevertheless, besides the research discoveries, my lasting legacy remains the outstanding mentees who have enriched my science and my life.

对科学和动物的热爱、坚持不懈的努力以及偶然的机遇推动了我在兽医病毒学和免疫学领域的职业生涯。我的研究重点是新生家畜和人类的致命肠道和呼吸道病毒感染,旨在了解其流行情况、发病机制、种间传播和免疫,并开发疫苗。对动物冠状病毒(CoVs)的研究,包括其广泛的种间传播,为了解新出现的人畜共患致命性人类呼吸道冠状病毒[严重急性呼吸系统综合征、中东呼吸系统综合征、严重急性呼吸系统综合征冠状病毒-2(SARS-CoV-2)]和 SARS-CoV-2 对动物的反向人畜共患病奠定了基础。我早期研究的一个亮点是发现了肠道-乳腺-IgA 轴,记录了共同的粘膜免疫系统。后者对于设计母体疫苗以获得新生儿的被动免疫仍然至关重要。我们发现并创新性地在无菌动物中繁殖快速的人类和动物轮状病毒和卡里西病毒及其感染性,为正在进行的病毒学和免疫学研究以及疫苗提供了细胞适应和动物疾病模型。然而,除了研究发现,我的永久遗产仍然是那些丰富了我的科学和生活的杰出导师们。
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引用次数: 0
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Annual Review of Animal Biosciences
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