基于网络药理学的Acori Tatarinowii Rhizoma抗阿尔茨海默病分子机制。

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Accounts of Chemical Research Pub Date : 2020-06-01 DOI:10.12659/MSMBR.924203
Yujia Zhang, Yangshen Wu, Yunbo Fu, Luning Lin, Yiyou Lin, Yehui Zhang, Liting Ji, Changyu Li
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引用次数: 0

摘要

背景:Acori Tatarinowii Rhizoma(ATR)是一种传统中药,用于治疗阿尔茨海默病(AD),这是一种世界性的退行性脑病。本研究的目的是利用网络药理学方法确定 ATR 在 AD 中的潜在机制和分子靶点。材料与方法 通过 PharmMapper 预测 ATR 活性成分的潜在靶点,并通过 DisGeNET 搜索阿尔茨海默病的靶点。对所有筛选出的基因进行交叉分析,以获得 ATR 活性成分的潜在靶点。利用 DAVID 数据库的注释功能,通过 STRING、GO Enrichment 和 KEGG 通路富集分析,建立了可能靶点的蛋白质-蛋白质相互作用网络。然后,使用 Cytoscape 建立了 "成分-靶点-通路 "网络。此外,还构建了 "疾病-成分-基因-途径 "网络,并通过分子对接方法进行了验证。此外,还利用活性成分 ß-asarone 和 ß-caryophyllene检测了Aß₁₋₄₂介导的SH-SY5Y细胞,并通过qRT-PCR估计了APP、Tau和核心靶基因的mRNA表达水平。结果 结果表明,ATR 的活性成分参与了癌症、炎症、细胞代谢和代谢途径等相关生物过程,并与 13 个预测靶点密切相关:ESR1、PPARG、AR、CASP3、JAK2、MAPK14、MAP2K1、ABL1、PTPN1、NR3C1、MET、INSR 和 PRKACA。ß-茶碱中的ATR活性成分能显著降低APP、TAU、ESR1、PTPN1和JAK2的mRNA表达水平。结论 系统研究了ATR活性成分对应的靶点和机制,为进一步研究ATR在AD中的作用机制提供了新的思路和方向。
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Anti-Alzheimer's Disease Molecular Mechanism of Acori Tatarinowii Rhizoma Based on Network Pharmacology.

BACKGROUND Acori Tatarinowii Rhizoma (ATR), a traditional Chinese herbal medicine, is used to treat Alzheimer's disease (AD), which is a worldwide degenerative brain disease. The aim of this study was to identify the potential mechanism and molecular targets of ATR in AD by using network pharmacology. MATERIAL AND METHODS The potential targets of the active ingredients of ATR were predicted by PharmMapper, and the targets of Alzheimer's disease were searched by DisGeNET. All screened genes were intersected to obtain potential targets for the active ingredients of ATR. The protein-protein interaction network of possible targets was established by STRING, GO Enrichment, and KEGG pathway enrichment analyses using the Annotation of DAVID database. Next, Cytoscape was used to build the "components-targets-pathways" networks. Additionally, a "disease-component-gene-pathways" network was constructed and verified by molecular docking methods. In addition, the active constituents ß-asarone and ß-caryophyllene were used to detect Aß₁₋₄₂-mediated SH-SY5Y cells, and mRNA expression levels of APP, Tau, and core target genes were estimated by qRT-PCR. RESULTS The results showed that the active components of ATR participate in related biological processes such as cancer, inflammation, cellular metabolism, and metabolic pathways and are closely related to the 13 predictive targets: ESR1, PPARG, AR, CASP3, JAK2, MAPK14, MAP2K1, ABL1, PTPN1, NR3C1, MET, INSR, and PRKACA. The ATR active components of ß-caryophyllene significantly reduced the mRNA expression levels of APP, TAU, ESR1, PTPN1, and JAK2. CONCLUSIONS The targets and mechanism corresponding to the active ingredients of ATR were investigated systematically, and novel ideas and directions were provided to further study the mechanism of ATR in AD.

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来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
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