玉米中介物CDK8模块的鉴定及转座子介导的ZmMed12a突变

IF 1 4区 生物学 Q4 DEVELOPMENTAL BIOLOGY International Journal of Developmental Biology Pub Date : 2021-01-01 DOI:10.1387/ijdb.200098sg
Ana L Alonso-Nieves, Tania Núñez-Ríos, Julio A Massange-Sánchez, Kevin R Ahern, Daniel Lepe-Soltero, Marcelina García-Aguilar, Thomas P Brutnell, Ruairidh J H Sawers, C Stewart Gillmor
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引用次数: 1

摘要

中介体是一种保守的转录共激活因子,它将结合在增强子元件上的转录因子与RNA聚合酶II连接起来。细胞周期蛋白依赖性激酶8 (CDK8)模块可以立体阻碍介质- rna聚合酶II的相互作用,CDK8模块是介质的一个子模块,在响应离散的细胞和环境信号时抑制转录。CDK8模块在所有真核生物中都是保守的,由4种蛋白组成:CDK8、CYCLIN C (CYCC)、MED12和MED13。在这项研究中,我们利用基因组、分子和功能资源对玉米中Mediator的CDK8模块进行了表征。玉米基因组包含Cdk8、CycC和Med13的单拷贝基因,以及Med12的两个基因。CDK8模块的表达数据分析表明,这五个基因在玉米组织中广泛表达,并在磷酸盐和氮限制下改变其表达。我们进行了解离(Ds)插入突变,恢复了ZmMed12a基因的两个独立插入,其中一个产生了截断的转录本。我们对玉米CDK8模块的分子鉴定、营养限制下CDK8模块的表达分析以及ZmMed12a转座子插入的表征,为研究这些重要的转录调控因子在玉米发育和营养稳态中的作用奠定了分子和功能基础。
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Identification of the maize Mediator CDK8 module and transposon-mediated mutagenesis of ZmMed12a.

Mediator is a conserved transcriptional co-activator that links transcription factors bound at enhancer elements to RNA Polymerase II. Mediator-RNA Polymerase II interactions can be sterically hindered by the Cyclin Dependent Kinase 8 (CDK8) module, a submodule of Mediator that acts to repress transcription in response to discrete cellular and environmental cues. The CDK8 module is conserved in all eukaryotes and consists of 4 proteins: CDK8, CYCLIN C (CYCC), MED12, and MED13. In this study, we have characterized the CDK8 module of Mediator in maize using genomic, molecular and functional resources. The maize genome contains single copy genes for Cdk8, CycC, and Med13, and two genes for Med12. Analysis of expression data for the CDK8 module demonstrated that all five genes are broadly expressed in maize tissues, and change their expression in response to phosphate and nitrogen limitation. We performed Dissociation (Ds) insertional mutagenesis, recovering two independent insertions in the ZmMed12a gene, one of which produces a truncated transcript. Our molecular identification of the maize CDK8 module, assays of CDK8 module expression under nutrient limitation, and characterization of transposon insertions in ZmMed12a establish the basis for molecular and functional studies of the role of these important transcriptional regulators in development and nutrient homeostasis in Zea mays.

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来源期刊
CiteScore
1.90
自引率
0.00%
发文量
16
审稿时长
2 months
期刊介绍: The International Journal of Developmental Biology (ISSN: 0214- 6282) is an independent, not for profit scholarly journal, published by scientists, for scientists. The journal publishes papers which throw light on our understanding of animal and plant developmental mechanisms in health and disease and, in particular, research which elucidates the developmental principles underlying stem cell properties and cancer. Technical, historical or theoretical approaches also fall within the scope of the journal. Criteria for acceptance include scientific excellence, novelty and quality of presentation of data and illustrations. Advantages of publishing in the journal include: rapid publication; free unlimited color reproduction; no page charges; free publication of online supplementary material; free publication of audio files (MP3 type); one-to-one personalized attention at all stages during the editorial process. An easy online submission facility and an open online access option, by means of which papers can be published without any access restrictions. In keeping with its mission, the journal offers free online subscriptions to academic institutions in developing countries.
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