Cel5H 蛋白质表面氨基酸在与粘土矿物结合中的作用及其作用力测量

Q3 Immunology and Microbiology Applied Microscopy Pub Date : 2021-11-11 DOI:10.1186/s42649-021-00066-7
Renukaradhya K. Math, Nagakumar Bharatham, Palaksha K. Javaregowda, Han Dae Yun
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引用次数: 0

摘要

我们之前关于 Cel5H 与粘土矿物之间结合活性的研究表明,在克隆的其他纤维素酶中,Cel5H 的结合效率最高。在此,基于之前的研究,我们假设 Cel5H 蛋白表面的正氨基酸可能在与粘土表面的结合中发挥了重要作用。为了研究这一点,我们分析了地衣芽孢杆菌 Cel5H(BlCel5H)和多粘芽孢杆菌 Cel5A(PpCel5A)的蛋白质序列,然后对选定的氨基酸进行了突变。通过原子力显微镜(AFM)对这些突变蛋白质的结合活性和力测量进行了研究。总共选择了 7 个只存在于 BlCel5H 而不存在于 PpCel5A 的氨基酸进行突变研究,而同时存在于两者的阳性残基则被省略。在所选的七个表面赖氨酸残基中,只有 K196A(M2)、K54A(M3) 和 K157T(M4) 三个突变体与野生型相比,粘土矿物结合能力分别降低了 12%、7% 和 8%。其他突变体之所以没有表现出结合效率的改变,可能与蛋白质表面氨基酸的相对位置有关。同时,对云母片上粘附力的测量显示,野生型蛋白的最大粘附力为 69 ± 19 pN,M2 为 58 ± 19 pN,M3 为 53 ± 19 pN,M4 为 49 ± 19 pN。因此,我们的研究结果表明,Cel5H 蛋白表面氨基酸的相对位置,尤其是带正电荷的氨基酸,在粘土矿物与蛋白质通过静电电荷交换结合相互作用的过程中非常重要。
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Role of Cel5H protein surface amino acids in binding with clay minerals and measurements of its forces

Our previous study on the binding activity between Cel5H and clay minerals showed highest binding efficiency among other cellulase enzymes cloned. Here, based on previous studies, we hypothesized that the positive amino acids on the surface of Cel5H protein may play an important role in binding to clay surfaces. To examine this, protein sequences of Bacillus licheniformis Cel5H (BlCel5H) and Paenibacillus polymyxa Cel5A (PpCel5A) were analyzed and then selected amino acids were mutated. These mutated proteins were investigated for binding activity and force measurement via atomic force microscopy (AFM). A total of seven amino acids which are only present in BlCel5H but not in PpCel5A were selected for mutational studies and the positive residues which are present in both were omitted. Of the seven selected surface lysine residues, only three mutants K196A(M2), K54A(M3) and K157T(M4) showed 12%, 7% and 8% less clay mineral binding ability, respectively compared with wild-type. The probable reason why other mutants did not show altered binding efficiency might be due to relative location of amino acids on the protein surface. Meanwhile, measurement of adhesion forces on mica sheets showed a well-defined maximum at 69 ± 19 pN for wild-type, 58 ± 19 pN for M2, 53 ± 19 pN for M3, and 49 ± 19 pN for M4 proteins. Hence, our results demonstrated that relative location of surface amino acids of Cel5H protein especially positive charged amino acids are important in the process of clay mineral-protein binding interaction through electrostatic exchange of charges.

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来源期刊
Applied Microscopy
Applied Microscopy Immunology and Microbiology-Applied Microbiology and Biotechnology
CiteScore
3.40
自引率
0.00%
发文量
10
审稿时长
10 weeks
期刊介绍: Applied Microscopy is a peer-reviewed journal sponsored by the Korean Society of Microscopy. The journal covers all the interdisciplinary fields of technological developments in new microscopy methods and instrumentation and their applications to biological or materials science for determining structure and chemistry. ISSN: 22875123, 22874445.
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