均匀/不均匀的概念:更少的均匀还是更多的不均匀?

IF 1.4 4区 生物学 Q4 MATHEMATICAL & COMPUTATIONAL BIOLOGY Acta Biotheoretica Pub Date : 2021-12-10 DOI:10.1007/s10441-021-09429-9
Hans-Rolf Gregorius, Elizabeth M. Gillet
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引用次数: 2

摘要

如果所有类型(物种、基因型、等位基因等)都被平等地表示(通过丰度、生物量、面积等),那么均匀性被理解为最大,其对立面,最大不均匀性,要么在概念上仍然处于黑暗状态,要么被认为是使应用均匀指数最小化的类型分布。然而,后一种方法经常导致概念上的不一致,因为最小分布是不可指定的或者是单态的。然而,单态的状态在其均匀/不均匀特性方面是不确定的。事实上,语义的不确定性也表现在单态表示既定均匀指数的明显不连续状态的观察中。这种严重的概念上的不一致潜伏在普遍持有的观点中,即均匀性是多样性的一个独立组成部分。因此,所建立的均匀度指数在很大程度上表现为相对多态性的指标,而不是均匀度的指标。为了达到均匀/不均匀的一致测量,确定哪些状态是最大不均匀的,然后评估最大均匀状态和最大不均匀状态之间给定类型分布的位置似乎是必不可少的。由于在语义上,不均匀性意味着类型表示之间的不平等,如果所有类型表示都相等不同,则不均匀性达到最大值。对于给定数量的类型,如果类型表示(按降序排列)在相邻类型之间显示相等的差异,则可以实现这种情况。我们称这种分布为“阶梯”,而不是均匀分布的“高原”。提出了两种新的均匀度测量方法,反映了最近阶梯和最近高原之间类型分布定位的不同观点。它们的两个极值表示完全均匀和完全不均匀的状态,中点假设表示普遍均匀和普遍不均匀之间的转折点。对于三种类型,用频率简单图上绘制的均匀曲面,以及更多类型的均匀曲面的横断面,以图形方式说明了这些措施。通过简单地用不同类型的对替换类型,可以将该方法推广到包括类型之间的变量差异(如在分析功能均匀性时所需要的)。例如,作为新类型的成对,可以用它们的丰度来表示,这些丰度可以通过形成成对的两种类型之间的差异以各种方式进行修改。因此,配对表示由配对类型之间的差异和它们的频率组成。对频率的遗漏会导致概念上的歧义。给定对表示的这种规范,可以使用为简单类型开发的相同索引来评估它们的均匀性/不均匀性。对均匀性可以量化分散均匀性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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The Concept of Evenness/Unevenness: Less Evenness or More Unevenness?

While evenness is understood to be maximal if all types (species, genotypes, alleles, etc.) are represented equally (via abundance, biomass, area, etc.), its opposite, maximal unevenness, either remains conceptually in the dark or is conceived as the type distribution that minimizes the applied evenness index. The latter approach, however, frequently leads to conceptual inconsistency due to the fact that the minimizing distribution is not specifiable or is monomorphic. The state of monomorphism, however, is indeterminate in terms of its evenness/unevenness characteristics. Indeed, the semantic indeterminacy also shows up in the observation that monomorphism represents a state of pronounced discontinuity for the established evenness indices. This serious conceptual inconsistency is latent in the widely held idea that evenness is an independent component of diversity. As a consequence, the established evenness indices largely appear as indicators of relative polymorphism rather than as indicators of evenness. In order to arrive at consistent measures of evenness/unevenness, it seems indispensable to determine which states are of maximal unevenness and then to assess the position of a given type distribution between states of maximal evenness and maximal unevenness. Since semantically, unevenness implies inequality among type representations, its maximum is reached if all type representations are equally different. For given number of types, this situation is realized if type representations, when ranked in descending order, show equal differences between adjacent types. We term such distributions “stepladders” as opposed to “plateaus” for uniform distributions. Two approaches to new evenness measures are proposed that reflect different perspectives on the positioning of type distributions between the closest stepladders and the closest plateaus. Their two extremes indicate states of complete evenness and complete unevenness, and the midpoint is postulated to represent the turning point between prevailing evenness and prevailing unevenness. The measures are graphically illustrated by evenness surfaces plotted above frequency simplices for three types, and by transects through evenness surfaces for more types. The approach can be generalized to include variable differences between types (as required in analyses of functional evenness) by simply replacing types with pairs of different types. Pairs, as the new types, can be represented by their abundances, for example, and these can be modified in various ways by the differences between the two types that form the pair. Pair representations thus consist of both the difference between the paired types and their frequency. Omission of pair frequencies leads to conceptual ambiguity. Given this specification of pair representations, their evenness/unevenness can be evaluated using the same indices developed for simple types. Pair evenness then turns out to quantify dispersion evenness.

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来源期刊
Acta Biotheoretica
Acta Biotheoretica 生物-生物学
CiteScore
2.70
自引率
7.70%
发文量
19
审稿时长
3 months
期刊介绍: Acta Biotheoretica is devoted to the promotion of theoretical biology, encompassing mathematical biology and the philosophy of biology, paying special attention to the methodology of formation of biological theory. Papers on all kind of biological theories are welcome. Interesting subjects include philosophy of biology, biomathematics, computational biology, genetics, ecology and morphology. The process of theory formation can be presented in verbal or mathematical form. Moreover, purely methodological papers can be devoted to the historical origins of the philosophy underlying biological theories and concepts. Papers should contain clear statements of biological assumptions, and where applicable, a justification of their translation into mathematical form and a detailed discussion of the mathematical treatment. The connection to empirical data should be clarified. Acta Biotheoretica also welcomes critical book reviews, short comments on previous papers and short notes directing attention to interesting new theoretical ideas.
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