磺胺噻唑类衍生物的合成、DFT分析及抗菌抗氧化活性评价与硅分子对接及ADMET预测。

IF 3.4 Q2 BIOCHEMICAL RESEARCH METHODS Biochemistry Research International Pub Date : 2021-12-14 eCollection Date: 2021-01-01 DOI:10.1155/2021/7534561
Yoseph Samuel, Ankita Garg, Endale Mulugeta
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引用次数: 6

摘要

磺胺噻唑衍生物的合成修饰随着其应用而成为提高其生物学性能的一个有趣途径。因此,磺胺噻唑类化合物成为一类很好的候选和潜在的有机化合物,在药物化学中发挥重要作用。本研究合成了一种噻唑衍生物和两种新的磺胺噻唑衍生物,产率分别为94%和72-81%。此外,采用圆盘扩散法测定了合成的化合物对两种革兰氏阴性菌(大肠杆菌和铜绿假单胞菌)和两种革兰氏阳性菌(化脓性葡萄球菌和金黄色葡萄球菌)的体外抗菌活性。在所合成的化合物中,化合物11a在50 mg/mL时对革兰氏阴性大肠杆菌的抑制范围为11.6±0.283 mm,而标准药物磺胺甲恶唑的抑制范围为15.7±0.707 mm。采用DPPH自由基测定法评价化合物的自由基清除能力,化合物11a的IC50值为1.655 μg/mL,活性最强。利用金黄色葡萄球菌螺旋酶(PDB ID: 2XCT)和人髓过氧化物酶(PDB ID: 1DNU)对合成的化合物进行了硅分子对接分析,发现其最小结合能在-7.8 ~ -10.0 kcal/mol之间,在-7.5 ~ -9.7 kcal/mol之间。化合物11a与这两种蛋白的结合得分为9.7 kcal/mol,与体外结果一致。化合物11b与这两种蛋白的结合分数也很高。预测了合成化合物的药物相似度和ADMET。合成化合物的DFT分析使用Gaussian 09进行,并通过Gauss view 6.0进行可视化。采用B3LYP/6-31 G (d,p)水平基集对先导化合物的结构坐标进行优化。研究表明,所有合成的化合物可能是进一步抗菌和抗氧化研究的候选物。
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Synthesis, DFT Analysis, and Evaluation of Antibacterial and Antioxidant Activities of Sulfathiazole Derivatives Combined with In Silico Molecular Docking and ADMET Predictions.

Synthetic modifications of sulfathiazole derivatives become an interesting approach to enhance their biological properties in line with their applications. As a result, sulfathiazole derivatives become a good candidate and potential class of organic compounds to play an important role towards medicinal chemistry. In present study, one thiazole derivative and two new sulfathiazole derivatives are synthesized with 94% and 72-81% yields, respectively. Furthermore, the synthesized compounds were evaluated for their in vitro antibacterial activity against two Gram-negative (E. coli and P. aeruginosa) and two Gram-positive bacterial strains (S. pyogenes and S. aureus) by disk diffusion method. Among synthesized compounds, compound 11a showed potent inhibitory activity against Gram-negative, E. coli with 11.6 ± 0.283 mm zone of inhibition compared to standard drug sulfamethoxazole (15.7 ± 0.707 mm) at 50 mg/mL. The radical scavenging activities of these compounds were evaluated using DPPH radical assay, and compound 11a showed the strongest activity with IC50 values of 1.655 μg/mL. The synthesized compounds were evaluated for their in silico molecular docking analysis using S. aureus gyrase (PDB ID: 2XCT) and human myeloperoxidase (PDB ID: 1DNU) and were found to have minimum binding energy ranging from -7.8 to -10.0 kcal/mol with 2XCT and -7.5 to -9.7 with 1DNU. Compound 11a showed very good binding score -9.7 kcal/mol with both of the proteins and had promising alignment with in vitro results. Compound 11b also showed high binding scores with both proteins. Drug likeness and ADMET of synthesized compounds were predicted. The DFT analysis of synthesized compounds was performed using Gaussian 09 and visualized through Gauss view 6.0. The structural coordinates of the lead compounds were optimized using B3LYP/6-31 G (d,p) level basis set without any symmetrical constraints. Studies revealed that all the synthesized compounds might be candidates for further antibacterial and antioxidant studies.

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来源期刊
Biochemistry Research International
Biochemistry Research International BIOCHEMICAL RESEARCH METHODS-
CiteScore
6.30
自引率
0.00%
发文量
27
审稿时长
14 weeks
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