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Potential Mechanisms of Lactate Dehydrogenase and Bovine Serum Albumin Proteins as Antioxidants: A Mixed Experimental-Computational Study.
IF 3.4 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-02-10 eCollection Date: 2025-01-01 DOI: 10.1155/bri/9638644
Jing Ye, Amy Bounds, Madeline Crumpton, Mallory Long, Haley McDonough, Isabella Srikhirisawan, Shanzhen Gao

Proteins have shown varying degrees of antioxidant activity. This study examined the potential mechanisms of interactions between proteins and radicals using chemical kinetics and computational methods. The study quantified the antioxidant activity of lactate dehydrogenase (LDH) and bovine serum albumin (BSA) through Trolox equivalent antioxidant capacity (TEAC) and oxygen radical absorbance capacity (ORAC) assays. BSA was about seven times and LDH 12 times more potent as antioxidants for 2,2'-azino-bis(3-ethylbenzothiazoline-6-sulfonate) (ABTS•-) than they were for peroxyl radicals. According to the evaluation of Trolox equivalents (TE) of 20 proteinogenic amino acids, tryptophan (with a TE value of 101 μmol TE/μmol) exhibited the highest antioxidant activity for ABTS•-, followed by tyrosine (38.7 μmol TE/μmol) and cysteine (30.5 μmol TE/μmol), lysine (0.193 μmol TE/μmol), arginine (0.0325 μmol TE/μmol), valine (0.0280 μmol TE/μmol), histidine (0.00689 μmol TE/μmol), and leucine (0.00560 μmol TE/μmol). The EC50 showed a similar order with a swap between valine and histidine. The antioxidant activity of the amino acids and proteins was temperature dependent. The rate laws, activation energy, and pre-exponential factor A of these reactions provided information on the reaction mechanisms, i.e., a biomolecular elementary step for the reaction of ABTS•- with amino acids tryptophan, tyrosine, cysteine, or protein LDH, and a more complicated mechanism for BSA. The presence of -NH- or hydroxyl groups on aromatic rings enhanced the antioxidant ability of tryptophan and tyrosine. LDH's antioxidant activity did not affect its enzymatic activity, indicating that the radical reaction likely happened on the protein's surface without significantly altering its conformation. The molecular modeling and visualization showed potential reaction sites on the proteins' accessible tryptophan and tyrosine residues. However, the mere surface exposure of tryptophan and tyrosine does not guarantee their antioxidant activities.

{"title":"Potential Mechanisms of Lactate Dehydrogenase and Bovine Serum Albumin Proteins as Antioxidants: A Mixed Experimental-Computational Study.","authors":"Jing Ye, Amy Bounds, Madeline Crumpton, Mallory Long, Haley McDonough, Isabella Srikhirisawan, Shanzhen Gao","doi":"10.1155/bri/9638644","DOIUrl":"10.1155/bri/9638644","url":null,"abstract":"<p><p>Proteins have shown varying degrees of antioxidant activity. This study examined the potential mechanisms of interactions between proteins and radicals using chemical kinetics and computational methods. The study quantified the antioxidant activity of lactate dehydrogenase (LDH) and bovine serum albumin (BSA) through Trolox equivalent antioxidant capacity (TEAC) and oxygen radical absorbance capacity (ORAC) assays. BSA was about seven times and LDH 12 times more potent as antioxidants for 2,2'-azino-bis(3-ethylbenzothiazoline-6-sulfonate) (ABTS<sup>•-</sup>) than they were for peroxyl radicals. According to the evaluation of Trolox equivalents (TE) of 20 proteinogenic amino acids, tryptophan (with a TE value of 101 μmol TE/μmol) exhibited the highest antioxidant activity for ABTS<sup>•-</sup>, followed by tyrosine (38.7 μmol TE/μmol) and cysteine (30.5 μmol TE/μmol), lysine (0.193 μmol TE/μmol), arginine (0.0325 μmol TE/μmol), valine (0.0280 μmol TE/μmol), histidine (0.00689 μmol TE/μmol), and leucine (0.00560 μmol TE/μmol). The EC50 showed a similar order with a swap between valine and histidine. The antioxidant activity of the amino acids and proteins was temperature dependent. The rate laws, activation energy, and pre-exponential factor A of these reactions provided information on the reaction mechanisms, i.e., a biomolecular elementary step for the reaction of ABTS<sup>•-</sup> with amino acids tryptophan, tyrosine, cysteine, or protein LDH, and a more complicated mechanism for BSA. The presence of -NH- or hydroxyl groups on aromatic rings enhanced the antioxidant ability of tryptophan and tyrosine. LDH's antioxidant activity did not affect its enzymatic activity, indicating that the radical reaction likely happened on the protein's surface without significantly altering its conformation. The molecular modeling and visualization showed potential reaction sites on the proteins' accessible tryptophan and tyrosine residues. However, the mere surface exposure of tryptophan and tyrosine does not guarantee their antioxidant activities.</p>","PeriodicalId":8826,"journal":{"name":"Biochemistry Research International","volume":"2025 ","pages":"9638644"},"PeriodicalIF":3.4,"publicationDate":"2025-02-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11832265/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143439833","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effect of Propolis on PPP2R1A and Apoptosis in Cancer Cells.
IF 3.4 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-01-15 eCollection Date: 2025-01-01 DOI: 10.1155/bri/5538068
Burak Durmaz, Latife Merve Oktay Çelebi, Ayşe Çekin, Ayshan Ahadova, Nur Selvi Günel, Hatice Kalkan Yıldırım, Ali Mert Özgönül, Eser Yıldırım Sözmen

Recently, it has been shown that protein phosphatase 2A (PP2A) dysfunction was common in many cancer types and was mediated by various inactivation mechanisms. Although many research studies observed antitumor effect of propolis extracts in various types of cancer, the mechanism of effect are still obscure. In this study, we investigated the effect of propolis on PPP2R1A expression and its relationship with apoptosis in the SW-620 (colorectal cancer), DU-145 and PC-3 (prostate cancer), and MCF-7 (breast cancer) cell lines, with WI-38 (healthy fibroblast) cells serving as the control. Moreover, we aimed to investigate the impact of propolis on apoptosis by analyzing apoptosis markers such as tumor necrosis factor-related apoptosis-inducing ligand (TRAIL), APAF-1, and caspases-3, -8, and -9. Propolis samples were extracted, and their phenolic compounds were quantified using LC-MS/MS. The RealTime Cell Analysis System-xCELLigence (RTCA-SP) device and software were employed to assess cell viability and cytotoxicity of the propolis samples. The IC50 values for propolis were determined (298 μg/mL for SW-620, 185.6 μg/mL for DU-145, 250.7 μg/mL for PC - 3, 292.9 μg/mL for MCF-7, and 311.2 μg/mL for WI-38). Subsequently, the effects of propolis on PPP2R1A expression and apoptosis markers (TRAIL, Apaf-1, and caspases-3, -8, and -9) were analyzed. When we compared the healthy cell lines to cancer cell lines, a statistically significant increase in caspase-3 (3.62-fold) and in TRAIL (4.38-fold) was observed in the SW-620 cell line after the application of propolis. In addition, in the PC-3 cell line, a 1.4-fold increase in caspase-8 was observed compared with the healthy cell line, which is also statistically significant. Our findings indicated that propolis increased the PPP2R1A levels and apoptosis markers in cancer cell lines. It has been suggested that high PPP2R1A levels induced by propolis treatment might activate the apoptosis pathway. In this study, the inducible effect of propolis on PPP2R1A levels, identified as a new target for cancer treatment, was demonstrated for the first time. The findings suggest that propolis holds promise as a potential cancer therapy by increasing PPP2R1A levels, a key molecule in cancer treatment.

{"title":"Effect of Propolis on PPP2R1A and Apoptosis in Cancer Cells.","authors":"Burak Durmaz, Latife Merve Oktay Çelebi, Ayşe Çekin, Ayshan Ahadova, Nur Selvi Günel, Hatice Kalkan Yıldırım, Ali Mert Özgönül, Eser Yıldırım Sözmen","doi":"10.1155/bri/5538068","DOIUrl":"10.1155/bri/5538068","url":null,"abstract":"<p><p>Recently, it has been shown that protein phosphatase 2A (PP2A) dysfunction was common in many cancer types and was mediated by various inactivation mechanisms. Although many research studies observed antitumor effect of propolis extracts in various types of cancer, the mechanism of effect are still obscure. In this study, we investigated the effect of propolis on PPP2R1A expression and its relationship with apoptosis in the SW-620 (colorectal cancer), DU-145 and PC-3 (prostate cancer), and MCF-7 (breast cancer) cell lines, with WI-38 (healthy fibroblast) cells serving as the control. Moreover, we aimed to investigate the impact of propolis on apoptosis by analyzing apoptosis markers such as tumor necrosis factor-related apoptosis-inducing ligand (TRAIL), APAF-1, and caspases-3, -8, and -9. Propolis samples were extracted, and their phenolic compounds were quantified using LC-MS/MS. The RealTime Cell Analysis System-xCELLigence (RTCA-SP) device and software were employed to assess cell viability and cytotoxicity of the propolis samples. The IC<sub>50</sub> values for propolis were determined (298 μg/mL for SW-620, 185.6 μg/mL for DU-145, 250.7 μg/mL for PC - 3, 292.9 μg/mL for MCF-7, and 311.2 μg/mL for WI-38). Subsequently, the effects of propolis on PPP2R1A expression and apoptosis markers (TRAIL, Apaf-1, and caspases-3, -8, and -9) were analyzed. When we compared the healthy cell lines to cancer cell lines, a statistically significant increase in caspase-3 (3.62-fold) and in TRAIL (4.38-fold) was observed in the SW-620 cell line after the application of propolis. In addition, in the PC-3 cell line, a 1.4-fold increase in caspase-8 was observed compared with the healthy cell line, which is also statistically significant. Our findings indicated that propolis increased the PPP2R1A levels and apoptosis markers in cancer cell lines. It has been suggested that high PPP2R1A levels induced by propolis treatment might activate the apoptosis pathway. In this study, the inducible effect of propolis on PPP2R1A levels, identified as a new target for cancer treatment, was demonstrated for the first time. The findings suggest that propolis holds promise as a potential cancer therapy by increasing PPP2R1A levels, a key molecule in cancer treatment.</p>","PeriodicalId":8826,"journal":{"name":"Biochemistry Research International","volume":"2025 ","pages":"5538068"},"PeriodicalIF":3.4,"publicationDate":"2025-01-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11756940/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143027754","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Current Perspectives in Detection of Bioactive Compounds From Costus spicatus Through GC-MS and LC-MS/MS: Antioxidant Properties and In Silico Analysis for Industrial Applications.
IF 3.4 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-01-15 eCollection Date: 2025-01-01 DOI: 10.1155/bri/9599942
Dharmar Manimaran, Ararsa Tessema, M Govindarajulu Yadav, S Parthasarathi, Vasan Palanisamy

Members of the Costus genus are the conventional medicinal plants used in the therapeutic management of numerous ailments, especially for their antioxidant and pharmacological activities. The crude extract of Costus spicatus was profiled using high-resolution GC-MS and LC-MS/MS techniques to determine possible bioactive compounds that are vital to the antioxidant activity. A total of 52 and 63 bioactive compounds have been detected in GC-MS chromatograms using different solvents (methanol and ethanol) in C. spicatus leaf extracts, representing the presence of certain bioactive compounds. The identified bioactive compounds in both extracts which exhibit neuroprotective effects have been confirmed through various literature studies. They are cholestan-3-amine, loliolide, stigmasterol and methylprednisolone acetate, succinimide, fumaric acid, beta-tocopherol and gamma-tocopherol. The aqueous extract possessed the highest antioxidant activity for DPPH scavenging activity and lipid peroxidation inhibition assays, whereas the alcoholic aqueous extract showed superior efficacy for hydroxyl radical scavenging activity. In this study, we performed molecular docking and found that four compounds exhibited promising binding affinities with predicted binding sites on alpha-synuclein. Notably, Androsta [17-16-b] furan-5'-imine, 4'-methylene-3-methoxy-N-cyclohexyl- showed the highest docking interaction score of -7.4, indicating a strong binding affinity. These findings, combined with the presence of bioactive components in the crude extract of C. spicatus, suggest that this plant may possess neuroprotective properties, warranting further investigation for potential industrial applications in the development of neuroprotective agents.

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引用次数: 0
A Novel Bispecific Anti-IL17/VEGF Fusion Trap Exhibits Potent and Long-Lasting Inhibitory Effects on the Development of Age-Related Macular Degeneration. 一种新型的双特异性抗il - 17/VEGF融合陷阱对年龄相关性黄斑变性的发展具有有效和持久的抑制作用。
IF 3.4 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-12-21 eCollection Date: 2024-01-01 DOI: 10.1155/bri/1405338
Lan Deng, Lihua Wang, Yun Meng, Jidai Zheng, Xia Dong, Ying Chen, Haomin Huang

Age-related macular degeneration (AMD) is a severe eye disease in people aged 60 years and older. Although anti-VEGF therapies are effective in treating neovascular AMD (NvAMD) in the clinic, up to 60% of patients do not completely respond to the therapies. Recent studies have shown that blood-derived macrophages and their associated proinflammatory cytokines may play important roles in the development of persistent disease and resistance to anti-VEGF therapy. To address this issue, we constructed an antibody-based bispecific fusion protein that can simultaneously inhibit IL-17-induced inflammation and VEGF-mediated neovascularization. As a result, the bispecific fusion protein 17V05 effectively inhibited multiple proinflammatory cytokines and chemokines, as well as laser-induced choroidal neovascularization (CNV). More importantly, 17V05 also exhibited stronger and longer inhibitory effects than conbercept in vivo. Thus, we provide a novel and promising strategy for treating AMD patients who are not sensitive to anti-VEGF therapies.

老年性黄斑变性(AMD)是一种严重的眼科疾病,多发于 60 岁及以上的人群。虽然抗血管内皮生长因子疗法在临床上能有效治疗新生血管性黄斑变性(NvAMD),但多达 60% 的患者对疗法没有完全反应。最近的研究表明,血源性巨噬细胞及其相关的促炎细胞因子可能在顽固性疾病的发展和抗血管内皮生长因子疗法的抗药性方面发挥重要作用。为了解决这个问题,我们构建了一种基于抗体的双特异性融合蛋白,它能同时抑制 IL-17 诱导的炎症和血管内皮生长因子介导的新生血管。结果,双特异性融合蛋白 17V05 有效抑制了多种促炎细胞因子和趋化因子,以及激光诱导的脉络膜新生血管(CNV)。更重要的是,17V05 在体内的抑制作用比康柏西汀更强更持久。因此,我们为治疗对抗血管内皮生长因子疗法不敏感的老年性黄斑变性患者提供了一种新颖而有前景的策略。
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引用次数: 0
Cholinesterase Inhibitory Activity of Paeoniflorin: Molecular Dynamics Simulation, and In Vitro Mechanistic Investigation. 芍药苷抑制胆碱酯酶活性:分子动力学模拟及体外机制研究。
IF 3.4 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-12-19 eCollection Date: 2024-01-01 DOI: 10.1155/bri/9192496
Mohnad Abdalla, Asaad Khalid, Jasmine Hedayati, Muhammad Nabeel Ghayur

Alzheimer's disease (AD), a neurological disorder, is one of the major reasons for memory loss in the world. AD is characterized by a sequela of cognitive and functional decline caused by brain cell degeneration. Paeoniflorin is a monoterpenoid glycoside found in plants of the Paeoniaceae family, which are known for their medicinal properties including dementia. In this project, we report actions of paeoniflorin on the two related cholinesterases (ChE): acetylChE (AChE) and butyrylChE (BuChE). Paeoniflorin, in a dose-dependent (maximum inhibition at 1 mg/mL) manner, inhibited both AChE (0.06-1 mg/mL) and BuChE (0.007-1 mg/mL) enzymes with maximum inhibition of AChE enzyme at 90.3 ± 1.4%, while 99.4 ± 0.3% for BuChE enzyme. The EC50 value for the inhibitory effect of the compound against AChE was 0.52 mg/mL (0.18-1.52), while against BuChE was 0.13 mg/mL (0.08-0.21). The observed ani-ChE action was like an effect also mediated by the known ChE blocker physostigmine. Molecular interactions between paeoniflorin and both ChE enzymes were additionally sought via molecular docking and molecular dynamics simulations for 100 ns, that showed paeoniflorin interacted with the active-site gorge of AChE and BuChE via hydrogen bonds and water bridging with the many amino acids of the AChE and BuChE enzymes. This study presents the ChE inhibitory potential of paeoniflorin against both AChE and BuChE enzymes. With this kind of inhibitory activity, the chemical can potentially increase ACh levels and may have use in the treatment of dementia of AD.

阿尔茨海默病(AD)是一种神经系统疾病,是世界上导致记忆丧失的主要原因之一。阿尔茨海默病的特点是由脑细胞变性引起的认知和功能下降的后遗症。芍药苷是在芍药科植物中发现的一种单萜类糖苷,以其包括痴呆症在内的药用特性而闻名。本项目报道了芍药苷对乙酰胆碱酯酶(AChE)和丁基胆碱酯酶(BuChE)两种相关胆碱酯酶(ChE)的作用。芍药苷对AChE (0.06-1 mg/mL)和BuChE (0.007-1 mg/mL)酶的抑制均呈剂量依赖性(最大抑制量为1 mg/mL), AChE酶的最大抑制量为90.3±1.4%,BuChE酶的最大抑制量为99.4±0.3%。化合物对AChE的EC50值为0.52 mg/mL(0.18 ~ 1.52),对BuChE的EC50值为0.13 mg/mL(0.08 ~ 0.21)。所观察到的抗ChE作用类似于已知的ChE阻滞剂毒豆碱介导的作用。此外,通过100 ns的分子对接和分子动力学模拟,研究了芍药苷与AChE和BuChE酶的分子相互作用,结果表明芍药苷通过氢键和水桥接与AChE和BuChE酶的许多氨基酸相互作用。本研究揭示了芍药苷对AChE和BuChE酶的抑酶潜力。由于这种抑制活性,该化学物质可能会增加乙酰胆碱水平,并可能用于治疗阿尔茨海默氏症痴呆。
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引用次数: 0
Evaluation of the Antibacterial and Antioxidant Properties of Chemical Constituents of the Roots of Woodfordia uniflora: An Integrated Approach of Experimental and Computational Study. 用实验与计算相结合的方法评价独叶木根化学成分的抗菌和抗氧化性能。
IF 3.4 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-12-03 eCollection Date: 2024-01-01 DOI: 10.1155/bri/1322756
Bihon Abera, Negera Abdissa, Milkyas Endale, Yadessa Melaku, Kebede Shenkute, Urgessa Ensermu, Mo Hunsen, Daniel Rentsch, Rajalakshmanan Eswaramoorthy
<p><p><i>Woodfordia uniflora</i> is a medicinal plant used for the treatment of malaria, toothache, and stomach problems. The root parts of the plant are also used for healing liver disorders. Silica gel chromatography separation of CH<sub>2</sub>Cl<sub>2</sub>/MeOH (1:1) and MeOH extracts of roots of <i>W. uniflora</i> result in the isolation of three compounds, namely, bergenin (<b>1</b>), <i>β</i>-sitosterol (<b>2</b>), and epigallocatechin 3-gallate (<b>3</b>), reported herein for the first time from the plant. The structure of the isolated compounds was elucidated using NMR (1D and 2D) techniques. Disk diffusion and DPPH assay were used to evaluate the antibacterial and antioxidant activities, respectively. Molecular docking was done by the AutoDock Vina 4.2 program. The pharmacokinetics and toxicity profile of compounds were predicted by Swiss ADME and Pro Tox II online servers. GC-MS analysis roots of <i>W. uniflora</i> result in the identification of five compounds, of which palmitic acid (34.9%) was the major constituent. The antibacterial activity result indicated that the oil extract had promising activity against <i>P. aeruginosa</i>, <i>E. coli</i>, <i>S. pyogenes</i>, and <i>S. aureus</i> with IZ of 14.3 ± 0.81, 15.0 ± 0.0, 15.6 ± 0.47, and 17.6 ± 0.47 mm, respectively, at 5 mg/mL, compared to ciprofloxacin (1Z 27-30.0 ± 0.0 mm) at 30 <i>μ</i>g/mL. MeOH and CH<sub>2</sub>Cl<sub>2</sub>/MeOH (1:1) extract showed inhibition against <i>E. coli</i> (IZ of 13.6 ± 0.47 mm) and <i>P. aeruginosa</i> (IZ of 10.0 ± 0.0 mm), respectively, at 200 mg/mL. Bergenin (<b>1</b>) and <i>β</i>-sitosterol (<b>2</b>) also displayed maximum inhibition of <i>E. coil</i> (IZ of 11.6 ± 0.47) and <i>S. aureus</i> (11.0 ± 0.0 mm), respectively, at 5 mg/mL. The antioxidant activity results showed that CH<sub>2</sub>Cl<sub>2</sub>/MeOH (1:1) and MeOH extracts, bergenin (<b>1</b>), and compound <b>3</b> displayed potent scavenging DPPH radical with a percentage of inhibition of 76.8 ± 0.12, 77.8 ± 0.08, 71.4 ± 0.08, and 91.2 ± 0.16, respectively, compared to ascorbic acid (93.2% ± 0.04%) at 100 <i>μ</i>g/mL. The molecular docking analysis showed that all compounds (<b>1</b>-<b>3)</b> exhibited minimum binding energy toward PDB ID: 1HD2 (-5.2 to -6.3 kcal/mol), compared to ascorbic acid (-5.6 kcal/mol), and toward PDB ID: 1DNU (-8.0 to -10.7 kcal/mol) receptors, compared to ascorbic acid (-5.7 kcal/mol). Toward the PDB ID: 4FM9 receptor, <i>β</i>-sitosterol (<b>2</b>) and compound <b>3</b> exhibited the best binding free energy of -9.1 and -9.8 kcal·mol, respectively, compared to vosaroxin (-7.8 kcal/mol). The drug-likeness analysis result indicated that bergenin (<b>1</b>) and <i>β</i>-sitosterol (<b>2</b>) obeyed four and five criteria of Lipinski's rule, respectively, and are more likely to be administered orally. The <i>in silico</i> toxicity analysis showed none of the compounds would be cytotoxic, mutagenic, or hepatotoxic. The in vitro antioxidant and antib
紫花木是一种药用植物,用于治疗疟疾、牙痛和胃病。这种植物的根部也用于治疗肝脏疾病。用硅胶层析法对单花w根的CH2Cl2/MeOH(1:1)和MeOH提取物进行分离,首次从该植物中分离到卑尔根素(1)、β-谷甾醇(2)和表没食子儿茶素3-没食子酸酯(3)三个化合物。通过核磁共振(1D和2D)技术对分离化合物的结构进行了分析。采用圆盘扩散法和DPPH法分别评价其抗菌活性和抗氧化活性。分子对接由AutoDock Vina 4.2程序完成。通过瑞士ADME和Pro Tox II在线服务器预测化合物的药代动力学和毒性谱。气相色谱-质谱分析鉴定出5种化合物,其中棕榈酸为主要成分(34.9%)。抑菌活性结果表明,与环丙沙星30 μg/mL (1z27 ~ 30.0±0.0 mm)相比,油提取物在5 mg/mL浓度下对铜绿假单胞菌、大肠杆菌、化脓性葡萄球菌和金黄色葡萄球菌的抑菌活性分别为14.3±0.81、15.0±0.0、15.6±0.47和17.6±0.47 mm。当浓度为200 mg/mL时,MeOH和CH2Cl2/MeOH(1:1)提取物对大肠杆菌(IZ为13.6±0.47 mm)和铜绿假单胞菌(IZ为10.0±0.0 mm)具有抑制作用。甜菜根素(1)和β-谷甾醇(2)在5 mg/mL时对大肠杆菌(11.6±0.47 mm)和金黄色葡萄球菌(11.0±0.0 mm)的抑制作用最大。结果表明,chch2cl2 /MeOH(1:1)和MeOH提取物、卑尔根素(1)、化合物3在100 μg/mL时对DPPH自由基的抑制率分别为76.8±0.12、77.8±0.08、71.4±0.08和91.2±0.16,而抗坏血酸(93.2%±0.04%)对DPPH自由基的抑制率为93.2%±0.04%。分子对接分析表明,与抗坏血酸(-5.6 kcal/mol)相比,所有化合物(1-3)对PDB ID: 1HD2 (-5.2 ~ -6.3 kcal/mol)的结合能最小,与抗坏血酸(-5.7 kcal/mol)相比,对PDB ID: 1DNU (-8.0 ~ -10.7 kcal/mol)受体的结合能最小。对于PDB ID: 4FM9受体,β-谷甾醇(2)和化合物3的结合自由能分别为-9.1和-9.8 kcal·mol,而沃沙oxin的结合自由能为-7.8 kcal/mol。药物相似性分析结果表明,牛膝菜素(1)和β-谷甾醇(2)分别符合Lipinski规则的4项和5项标准,更适合口服给药。硅毒性分析表明,这些化合物没有细胞毒性、诱变性或肝毒性。体外抗氧化和抑菌实验结果支持硅晶硅分析,表明单根具有治疗细菌感染和自由基诱导疾病的潜力。
{"title":"Evaluation of the Antibacterial and Antioxidant Properties of Chemical Constituents of the Roots of <i>Woodfordia uniflora</i>: An Integrated Approach of Experimental and Computational Study.","authors":"Bihon Abera, Negera Abdissa, Milkyas Endale, Yadessa Melaku, Kebede Shenkute, Urgessa Ensermu, Mo Hunsen, Daniel Rentsch, Rajalakshmanan Eswaramoorthy","doi":"10.1155/bri/1322756","DOIUrl":"10.1155/bri/1322756","url":null,"abstract":"&lt;p&gt;&lt;p&gt;&lt;i&gt;Woodfordia uniflora&lt;/i&gt; is a medicinal plant used for the treatment of malaria, toothache, and stomach problems. The root parts of the plant are also used for healing liver disorders. Silica gel chromatography separation of CH&lt;sub&gt;2&lt;/sub&gt;Cl&lt;sub&gt;2&lt;/sub&gt;/MeOH (1:1) and MeOH extracts of roots of &lt;i&gt;W. uniflora&lt;/i&gt; result in the isolation of three compounds, namely, bergenin (&lt;b&gt;1&lt;/b&gt;), &lt;i&gt;β&lt;/i&gt;-sitosterol (&lt;b&gt;2&lt;/b&gt;), and epigallocatechin 3-gallate (&lt;b&gt;3&lt;/b&gt;), reported herein for the first time from the plant. The structure of the isolated compounds was elucidated using NMR (1D and 2D) techniques. Disk diffusion and DPPH assay were used to evaluate the antibacterial and antioxidant activities, respectively. Molecular docking was done by the AutoDock Vina 4.2 program. The pharmacokinetics and toxicity profile of compounds were predicted by Swiss ADME and Pro Tox II online servers. GC-MS analysis roots of &lt;i&gt;W. uniflora&lt;/i&gt; result in the identification of five compounds, of which palmitic acid (34.9%) was the major constituent. The antibacterial activity result indicated that the oil extract had promising activity against &lt;i&gt;P. aeruginosa&lt;/i&gt;, &lt;i&gt;E. coli&lt;/i&gt;, &lt;i&gt;S. pyogenes&lt;/i&gt;, and &lt;i&gt;S. aureus&lt;/i&gt; with IZ of 14.3 ± 0.81, 15.0 ± 0.0, 15.6 ± 0.47, and 17.6 ± 0.47 mm, respectively, at 5 mg/mL, compared to ciprofloxacin (1Z 27-30.0 ± 0.0 mm) at 30 &lt;i&gt;μ&lt;/i&gt;g/mL. MeOH and CH&lt;sub&gt;2&lt;/sub&gt;Cl&lt;sub&gt;2&lt;/sub&gt;/MeOH (1:1) extract showed inhibition against &lt;i&gt;E. coli&lt;/i&gt; (IZ of 13.6 ± 0.47 mm) and &lt;i&gt;P. aeruginosa&lt;/i&gt; (IZ of 10.0 ± 0.0 mm), respectively, at 200 mg/mL. Bergenin (&lt;b&gt;1&lt;/b&gt;) and &lt;i&gt;β&lt;/i&gt;-sitosterol (&lt;b&gt;2&lt;/b&gt;) also displayed maximum inhibition of &lt;i&gt;E. coil&lt;/i&gt; (IZ of 11.6 ± 0.47) and &lt;i&gt;S. aureus&lt;/i&gt; (11.0 ± 0.0 mm), respectively, at 5 mg/mL. The antioxidant activity results showed that CH&lt;sub&gt;2&lt;/sub&gt;Cl&lt;sub&gt;2&lt;/sub&gt;/MeOH (1:1) and MeOH extracts, bergenin (&lt;b&gt;1&lt;/b&gt;), and compound &lt;b&gt;3&lt;/b&gt; displayed potent scavenging DPPH radical with a percentage of inhibition of 76.8 ± 0.12, 77.8 ± 0.08, 71.4 ± 0.08, and 91.2 ± 0.16, respectively, compared to ascorbic acid (93.2% ± 0.04%) at 100 &lt;i&gt;μ&lt;/i&gt;g/mL. The molecular docking analysis showed that all compounds (&lt;b&gt;1&lt;/b&gt;-&lt;b&gt;3)&lt;/b&gt; exhibited minimum binding energy toward PDB ID: 1HD2 (-5.2 to -6.3 kcal/mol), compared to ascorbic acid (-5.6 kcal/mol), and toward PDB ID: 1DNU (-8.0 to -10.7 kcal/mol) receptors, compared to ascorbic acid (-5.7 kcal/mol). Toward the PDB ID: 4FM9 receptor, &lt;i&gt;β&lt;/i&gt;-sitosterol (&lt;b&gt;2&lt;/b&gt;) and compound &lt;b&gt;3&lt;/b&gt; exhibited the best binding free energy of -9.1 and -9.8 kcal·mol, respectively, compared to vosaroxin (-7.8 kcal/mol). The drug-likeness analysis result indicated that bergenin (&lt;b&gt;1&lt;/b&gt;) and &lt;i&gt;β&lt;/i&gt;-sitosterol (&lt;b&gt;2&lt;/b&gt;) obeyed four and five criteria of Lipinski's rule, respectively, and are more likely to be administered orally. The &lt;i&gt;in silico&lt;/i&gt; toxicity analysis showed none of the compounds would be cytotoxic, mutagenic, or hepatotoxic. The in vitro antioxidant and antib","PeriodicalId":8826,"journal":{"name":"Biochemistry Research International","volume":"2024 ","pages":"1322756"},"PeriodicalIF":3.4,"publicationDate":"2024-12-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11631344/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142805930","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Toxicity of Oils Extracted From the Arils of Blighia sapida (K.D. Koenig) in Wistar Rats. 从 Blighia sapida (K.D. Koenig) 的果仁中提取的油对 Wistar 大鼠的毒性。
IF 3.4 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-11-08 eCollection Date: 2024-01-01 DOI: 10.1155/2024/1998836
Aklesso Nabede, Haziz Sina, Mélila Mamatchi, Tiatou Souho, Batcha Ouadja, S M Ismaël Hoteyi, Hafiz A Salami, Adolphe Adjanohoun, Lamine Baba-Moussa, Kou'santa Amouzou

Blighia sapida oil, a substance with a rich history of use for its nutritional, therapeutic, traditional, and cosmetic benefits, was the focus of our study. We investigated the impact of consuming edible oil from B. sapida arils on Wistar rats. The crude oil from unripe arils was extracted using cold pressing and then administered to the rats. The toxicity was evaluated according to the OECD method. Notably, there were no signs of food poisoning or adverse effects on the weight and behavior of the rats treated with B. sapida oils. The LD50 of the oil was more significant than 5000 mg/kg of body weight, and hematological and biochemical parameters did not differ significantly from the control group. Rats fed with an oil-supplemented diet showed an increase in weight compared to the negative control group. No fatty deposits were found in vital organs, and consuming the oil did not affect the immune system or biochemical biomarkers. However, excessive intake of fat may have harmful effects on tissues. Our findings strongly suggest that B. sapida oil is safe for consumption within reasonable limits. The data we present here reveal that the oil derived from B. sapida is suitable for moderate consumption and may offer various health advantages, a potential that warrants further exploration.

无患子油是一种具有丰富营养、治疗、传统和美容功效的物质,是我们研究的重点。我们研究了食用无花果油对 Wistar 大鼠的影响。我们使用冷压法从未成熟的假种皮中提取粗油,然后给大鼠食用。根据经合组织的方法对其毒性进行了评估。值得注意的是,使用无患子油的大鼠没有出现食物中毒的迹象,体重和行为也没有受到不良影响。该油的半数致死剂量大于 5000 毫克/千克体重,血液学和生化指标与对照组没有明显差异。与阴性对照组相比,用油添加剂喂养的大鼠体重有所增加。在重要器官中没有发现脂肪沉积,食用油也没有影响免疫系统或生化生物标志物。然而,过量摄入脂肪可能会对组织产生有害影响。我们的研究结果有力地表明,在合理范围内食用无患子油是安全的。我们在此提供的数据显示,从无患子中提取的油适合适量食用,并可能提供各种健康优势,这一潜力值得进一步探索。
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引用次数: 0
Xylooligosaccharide Production From Lignocellulosic Biomass and Their Health Benefits as Prebiotics. 从木质纤维素生物质中生产低聚木糖及其作为益生元对健康的益处。
IF 3.4 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-11-05 eCollection Date: 2024-01-01 DOI: 10.1155/2024/6179375
Kajal Kumari, Sushil Nagar, Sakshi Goyal, Sonu Maan, Vishal Chugh, Vinod Kumar, Neeraj Kharor

Lignocellulosic biomass (LCB) comprising of wheat bran, coconut husk, rice husk, cereals straw, and other hardwood and softwoods is a good source for the production of xylooligosaccharides (XOS) (prebiotic). XOS produced are nondigestible carbohydrates being stable under stomach pH and digestive enzymes so they can be easily delivered to the intestine in native form, thus stimulating the growth of probiotics. Here we review about the raw material, production, purification, and application of XOS with health benefits. Importance of XOS being valuable food ingredient is increasing as they perform a variety of functions, including reduction in cholesterol levels, gastrointestinal health maintenance, anticancer and antioxidant properties, and modulation of immune system. We also discuss the different characterization methods which are necessary to determine the degree of polymerization (DP) of XOS. Low DP (xylobiose and xylotriose) is usually preferred for the application of XOS in various sectors. This review emphasizes the growing significance of XOS as a prebiotic, serving as nourishment for probiotics.

木质纤维素生物质(LCB)包括麦麸、椰子壳、稻壳、谷物秸秆以及其他硬木和软木,是生产木寡糖(XOS)(益生元)的良好来源。生产的 XOS 是不可消化的碳水化合物,在胃的 pH 值和消化酶的作用下非常稳定,因此很容易以原生态的形式输送到肠道,从而刺激益生菌的生长。在此,我们将对具有健康益处的 XOS 的原料、生产、提纯和应用进行综述。XOS 具有多种功能,包括降低胆固醇水平、维护胃肠道健康、抗癌和抗氧化特性以及调节免疫系统,因此作为有价值的食品配料,其重要性与日俱增。我们还讨论了确定 XOS 聚合度(DP)所需的不同表征方法。低聚合度(木糖和木三糖)通常是将 XOS 应用于各个领域的首选。本综述强调,作为益生菌的营养品,木糖醇作为益生元的重要性与日俱增。
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引用次数: 0
Hypoglycemic Assessment of Aqueous Leaf Extract of Moringa oleifera on Diabetic Wistar Rats. 辣木叶水提取物对糖尿病 Wistar 大鼠的降血糖作用评估
IF 3.4 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-10-23 eCollection Date: 2024-01-01 DOI: 10.1155/2024/9779021
Egbujo Ejike Amina, James O Adisa, Solomon Matthias Gamde, Etinosa Beauty Omoruyi, Habauka M Kwaambwa, Lamech M Mwapagha

Background: Moringa oleifera leaf is used for diabetes due to its pharmacologic effects. Patients with hyperglycemia experience beta cell destruction. However, no research on risk awareness has been done to ascertain its safety. The present study describes the antidiabetic effect of Moringa oleifera leaf, such as the protection of pancreatic beta cells and the induction of glycogen synthesis, before addressing the secondary effects of diabetes, such as hepatic and renal toxicity. Methods: Forty-five Wistar rats weighed 160 ± 10 g were divided into nine groups. All animal operations complied with the National Institute of Health (NIH) guidelines for the care and use of laboratory animals as approved by the Animal Ethical Committee, University of Jos. Group I was normal control and Group II was diabetic animals induced with alloxan. Insulin and extract doses of 200, 400, and 800 mg/kg were given to diabetic Groups III-VI. Normal animals in Groups VII-IX were given extract at doses of 200, 400, and 800 mg/kg for 28 days. Tissues were retrieved for biochemical and histological investigations using standard techniques. Results: There was decrease relative body weight of diabetic animals (95.50 ± 5.50) when compared to normal control (142.75 ± 20.08) with increased levels of urea (control 6.13 ± 0.523 and diabetes 29.23 ± 1.267) and creatinine (control 0.70 ± 0.057 and diabetes 2.13 ± 0.185). Histology of the liver and pancreas also points to organ damage due to hyperglycemia. However, oral administration of extract showed antidiabetic effect with protection of pancreatic beta cells and the induction of glycogen synthesis, no glycogen was deposited in the liver, addressing the secondary effects of diabetes, such as hepatic and renal toxicity. Further discovery revealed that extract elevated antioxidant enzyme expression. Conclusion: Leaf extract from Moringa oleifera reduces blood sugar and lessens the damage caused by hyperglycemia in the pancreas and liver.

背景:油辣木叶因其药理作用被用于治疗糖尿病。高血糖患者的β细胞会遭到破坏。然而,尚未开展风险意识研究以确定其安全性。本研究介绍了油辣木叶的抗糖尿病作用,如保护胰岛β细胞和诱导糖原合成,然后探讨了糖尿病的副作用,如肝毒性和肾毒性。研究方法45 只体重为 160±10 克的 Wistar 大鼠分为 9 组。I 组为正常对照组,II 组为用阿脲诱导的糖尿病动物。胰岛素和提取物剂量分别为 200、400 和 800 毫克/千克,用于糖尿病组 III-VI。给第七至第九组的正常动物服用提取物,剂量分别为 200、400 和 800 毫克/千克,持续 28 天。采用标准技术提取组织进行生化和组织学研究。结果与正常对照组(142.75 ± 20.08)相比,糖尿病动物的相对体重下降(95.50 ± 5.50),尿素(对照组为 6.13 ± 0.523,糖尿病组为 29.23 ± 1.267)和肌酐(对照组为 0.70 ± 0.057,糖尿病组为 2.13 ± 0.185)水平升高。肝脏和胰腺的组织学检查也表明,高血糖会导致器官损伤。然而,口服提取物具有抗糖尿病作用,可保护胰腺β细胞并诱导糖原合成,肝脏中没有糖原沉积,从而解决了糖尿病的继发性影响,如肝毒性和肾毒性。进一步研究发现,提取物能提高抗氧化酶的表达。结论油辣木叶提取物能降低血糖,减轻高血糖对胰腺和肝脏造成的损害。
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引用次数: 0
Comparative Analysis of Phytochemicals and Antioxidant Characterization Among Different Parts of Catharanthus roseus: In Vitro and In Silico Investigation. 蔷薇科植物不同部位的植物化学成分和抗氧化特性比较分析:体外和体内研究
IF 3.4 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-10-18 eCollection Date: 2024-01-01 DOI: 10.1155/2024/1904029
Farjana Akter Hira, Ashekul Islam, Kanika Mitra, Ummey Hafsa Bithi, Khondoker Shahin Ahmed, Sanzida Islam, Shaike Mohammad Abdullah, Md Nazim Uddin

Background: The study investigates the antioxidant properties of Catharanthus roseus, focusing on identifying its antioxidant compounds and chemical constituents. We compare antioxidant activities across its root, stem, flower, and leaf and examine the inhibition of reactive oxygen species (ROS)-generating enzymes by the plant's phytocompounds. Methods: We conducted a comprehensive analysis that included proximate analysis, mineral content assessment, and in vitro antioxidant characterization of various plant parts-root, stem, flower, and leaf. The levels of bioactive phytochemicals in both ethanol and mixed-solvent extracts of Catharanthus roseus were quantified using high-performance liquid chromatography with a diode array detector (HPLC-DAD). Additionally, we performed molecular docking studies to explore the interactions of quantified phytocompounds. Results: HPLC-DAD analysis quantified catechin hydrate, catechol, (-) epicatechin, rutin hydrate, trans-cinnamic acid, quercetin, vanillic acid, kaempferol, and trans-ferulic acid in Catharanthus roseus. Despite the ethanol extract having higher total antioxidant properties and flavonoid content, the mixed-solvent extract exhibited higher EC50 for reducing power and lower IC50 for ABTS, 2,2-diphenyl-1-picrylhydrazyl (DPPH), and metal chelating activities. Molecular docking studies indicated that compounds such as catechin, rutin, epicatechin, quercetin, and kaempferol significantly inhibit the ROS-generating enzyme microsomal prostaglandin E synthase 1 (mPGES-1). Conclusions: The mixed-solvent extract had higher levels of catechin hydrate, rutin hydrate, trans-ferulic acid, and vanillic acid, whereas the ethanol extract contained more (-) epicatechin, catechol, kaempferol, quercetin, and trans-cinnamic acid. While the extracts displayed antioxidant activity, the phytoconstituents also inhibited ROS-generating mPGES-1. These results identify key compounds with potential for developing new chemotherapeutic agents against ROS.

背景:本研究调查了长春花的抗氧化特性,重点是确定其抗氧化化合物和化学成分。我们比较了其根、茎、花和叶的抗氧化活性,并研究了该植物的植物化合物对活性氧(ROS)生成酶的抑制作用。研究方法我们对植物的各个部分(根、茎、花和叶)进行了全面分析,包括近似分析、矿物质含量评估和体外抗氧化特性鉴定。我们使用带二极管阵列检测器的高效液相色谱法(HPLC-DAD)对石竹的乙醇提取物和混合溶剂提取物中生物活性植物化学物质的含量进行了定量分析。此外,我们还进行了分子对接研究,以探索定量植物化合物之间的相互作用。结果HPLC-DAD 分析定量了儿茶素水合物、儿茶酚、(-) 表儿茶素、芦丁水合物、反式肉桂酸、槲皮素、香草酸、山柰酚和反式阿魏酸。尽管乙醇提取物的总抗氧化性和类黄酮含量较高,但混合溶剂提取物的还原力 EC50 值较高,ABTS、2,2-二苯基-1-苦基肼(DPPH)和金属螯合活性的 IC50 值较低。分子对接研究表明,儿茶素、芦丁、表儿茶素、槲皮素和山柰醇等化合物能显著抑制 ROS 生成酶微粒体前列腺素 E 合酶 1(mPGES-1)。结论混合溶剂提取物中的儿茶素水合物、芦丁水合物、反式阿魏酸和香草酸含量较高,而乙醇提取物中的(-)表儿茶素、儿茶酚、山奈儿茶酚、槲皮素和反式肉桂酸含量较高。在提取物显示出抗氧化活性的同时,植物成分还抑制了产生 ROS 的 mPGES-1。这些结果确定了一些关键化合物,它们具有开发新的抗 ROS 化疗药物的潜力。
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引用次数: 0
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Biochemistry Research International
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