{"title":"粪盐单胞菌,一种从人类粪便中分离出来的嗜盐细菌。","authors":"Zhu-Xiang Liu, Jin-Hua Chen, Ling-Ling Yang, Yu-Zhou Feng, Li-Ying Deng, Jian-Wu He, Shu-Kun Tang, Yi-Guang Chen","doi":"10.1007/s00792-022-01269-w","DOIUrl":null,"url":null,"abstract":"<p><p>A novel moderately halophilic, Gram-stain-negative, catalase- and oxidase-positive, strictly aerobic, non-sporulating, non-motile rod, designated strain JSM 104105<sup> T</sup>, was isolated from human faeces. Strain JSM 104105<sup> T</sup> was able to grow with 0.5-18% (w/v) NaCl (optimum 4-9%), at pH 6-10.5 (optimum pH 7-8) and at 10-40 °C (optimum 30 °C) in complex media. The major cellular fatty acids were C<sub>18:1</sub>ω7c, C<sub>16:0</sub>, C<sub>16:1</sub>ω7c and/or C<sub>16:1</sub>ω6c, C<sub>19:0</sub> cyclo ω8c and C<sub>12:0</sub> 3-OH. The polar lipids consisted of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, an unidentified aminophospholipid, an unidentified glycolipid and three unidentified phospholipids. The predominant respiratory quinone was Q-9 and the genomic DNA G + C content was 64.5 mol%. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain JSM 104105<sup> T</sup> should be assigned to the genus Halomonas, and was most closely related to Halomonas gudaonensis SL014B-69<sup> T</sup> (99.0% sequence similarity), followed by Halomonas azerbaijanica TBZ202<sup>T</sup> (98.6%) and Halomonas lysinitropha 3(2)<sup>T</sup> (97.3%). The whole genomic analysis showed that strain JSM 104105<sup> T</sup> constituted a different taxon separated from the recognized Halomonas species. Combined data from phenotypic and genotypic studies demonstrated that strain JSM 104105<sup> T</sup> represents a new species of the genus Halomonas, for which the name Halomonas faecis sp. nov. is proposed. The type strain is JSM 104105<sup> T</sup> (= CCTCC AB 2014160<sup> T</sup> = CGMCC 1.12945<sup> T</sup> = KCTC 42146<sup> T</sup>).</p>","PeriodicalId":2,"journal":{"name":"ACS Applied Bio Materials","volume":null,"pages":null},"PeriodicalIF":4.6000,"publicationDate":"2022-06-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"Halomonas faecis sp. nov., a halophilic bacterium isolated from human faeces.\",\"authors\":\"Zhu-Xiang Liu, Jin-Hua Chen, Ling-Ling Yang, Yu-Zhou Feng, Li-Ying Deng, Jian-Wu He, Shu-Kun Tang, Yi-Guang Chen\",\"doi\":\"10.1007/s00792-022-01269-w\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>A novel moderately halophilic, Gram-stain-negative, catalase- and oxidase-positive, strictly aerobic, non-sporulating, non-motile rod, designated strain JSM 104105<sup> T</sup>, was isolated from human faeces. Strain JSM 104105<sup> T</sup> was able to grow with 0.5-18% (w/v) NaCl (optimum 4-9%), at pH 6-10.5 (optimum pH 7-8) and at 10-40 °C (optimum 30 °C) in complex media. The major cellular fatty acids were C<sub>18:1</sub>ω7c, C<sub>16:0</sub>, C<sub>16:1</sub>ω7c and/or C<sub>16:1</sub>ω6c, C<sub>19:0</sub> cyclo ω8c and C<sub>12:0</sub> 3-OH. The polar lipids consisted of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, an unidentified aminophospholipid, an unidentified glycolipid and three unidentified phospholipids. The predominant respiratory quinone was Q-9 and the genomic DNA G + C content was 64.5 mol%. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain JSM 104105<sup> T</sup> should be assigned to the genus Halomonas, and was most closely related to Halomonas gudaonensis SL014B-69<sup> T</sup> (99.0% sequence similarity), followed by Halomonas azerbaijanica TBZ202<sup>T</sup> (98.6%) and Halomonas lysinitropha 3(2)<sup>T</sup> (97.3%). The whole genomic analysis showed that strain JSM 104105<sup> T</sup> constituted a different taxon separated from the recognized Halomonas species. Combined data from phenotypic and genotypic studies demonstrated that strain JSM 104105<sup> T</sup> represents a new species of the genus Halomonas, for which the name Halomonas faecis sp. nov. is proposed. The type strain is JSM 104105<sup> T</sup> (= CCTCC AB 2014160<sup> T</sup> = CGMCC 1.12945<sup> T</sup> = KCTC 42146<sup> T</sup>).</p>\",\"PeriodicalId\":2,\"journal\":{\"name\":\"ACS Applied Bio Materials\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":4.6000,\"publicationDate\":\"2022-06-18\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"ACS Applied Bio Materials\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1007/s00792-022-01269-w\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"MATERIALS SCIENCE, BIOMATERIALS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"ACS Applied Bio Materials","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1007/s00792-022-01269-w","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"MATERIALS SCIENCE, BIOMATERIALS","Score":null,"Total":0}
引用次数: 1
摘要
从人类粪便中分离到一株新的中度嗜盐、革兰氏染色阴性、过氧化氢酶和氧化酶阳性、严格需氧、不产孢、不活动的杆状菌,命名为菌株JSM 104105 T。菌株JSM 104105 T能够在0.5-18% (w/v) NaCl(最适4-9%)、pH 6-10.5(最适pH 7-8)和10-40°C(最适30°C)的复合培养基中生长。主要的细胞脂肪酸有C18:1ω7c、C16:0、C16:1ω7c和/或C16:1ω6c、C19:0 cyclo ω8c和C12:0 3-OH。极性脂质由二磷脂酰甘油、磷脂酰甘油、磷脂酰乙醇胺、一种未识别的氨基磷脂、一种未识别的糖脂和三种未识别的磷脂组成。主要呼吸醌为Q-9,基因组DNA G + C含量为64.5 mol%。基于16S rRNA基因序列的系统发育分析表明,菌株JSM 104105 T属于盐单胞菌属,与古达单胞菌SL014B-69 T亲缘关系最密切(99.0%),其次是阿塞拜疆盐单胞菌TBZ202T(98.6%)和溶initropha盐单胞菌3(2)T(97.3%)。全基因组分析表明,菌株JSM 104105 T与已知的盐单胞菌属属分离为一个不同的分类单元。表型和基因型研究结果表明,菌株JSM 104105 T是盐单胞菌属的一个新种,并建议将其命名为盐单胞菌faecis sp. 11。型应变为JSM 104105 T (= CCTCC AB 2014160 T = CGMCC 1.12945 T = KCTC 42146 T)。
Halomonas faecis sp. nov., a halophilic bacterium isolated from human faeces.
A novel moderately halophilic, Gram-stain-negative, catalase- and oxidase-positive, strictly aerobic, non-sporulating, non-motile rod, designated strain JSM 104105 T, was isolated from human faeces. Strain JSM 104105 T was able to grow with 0.5-18% (w/v) NaCl (optimum 4-9%), at pH 6-10.5 (optimum pH 7-8) and at 10-40 °C (optimum 30 °C) in complex media. The major cellular fatty acids were C18:1ω7c, C16:0, C16:1ω7c and/or C16:1ω6c, C19:0 cyclo ω8c and C12:0 3-OH. The polar lipids consisted of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, an unidentified aminophospholipid, an unidentified glycolipid and three unidentified phospholipids. The predominant respiratory quinone was Q-9 and the genomic DNA G + C content was 64.5 mol%. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain JSM 104105 T should be assigned to the genus Halomonas, and was most closely related to Halomonas gudaonensis SL014B-69 T (99.0% sequence similarity), followed by Halomonas azerbaijanica TBZ202T (98.6%) and Halomonas lysinitropha 3(2)T (97.3%). The whole genomic analysis showed that strain JSM 104105 T constituted a different taxon separated from the recognized Halomonas species. Combined data from phenotypic and genotypic studies demonstrated that strain JSM 104105 T represents a new species of the genus Halomonas, for which the name Halomonas faecis sp. nov. is proposed. The type strain is JSM 104105 T (= CCTCC AB 2014160 T = CGMCC 1.12945 T = KCTC 42146 T).