Massimiliano Russo, Burton H Singer, David B Dunson
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引用次数: 0
摘要
即使使用中等数量的类别(如 4 个),在分类方案中描述个体的共享成员资格也会带来严重的可解释性问题。混合成员模型可以量化这种现象,但它们通常更注重拟合度,而不是可解释性推断。为了实现良好的数值拟合,这些模型实际上可能需要许多极端剖面,从而使结果难以解释。我们引入了一类新的多元混合成员模型,当变量可以划分为基于主题的领域时,该模型可以使用比标准公式更少的剖面对数据进行良好拟合。所提出的模型明确考虑了与不同领域相对应的变量块以及跨领域相关结构,从而为复杂分类方案中的个体共享成员身份提供了新的信息。我们为成员向量指定了一个多变量逻辑正态分布,这样就可以利用潜在的多变量逻辑回归轻松引入辅助信息。贝叶斯推理方法依赖于 Pólya gamma 数据增强,通过马尔可夫链蒙特卡罗(Markov Chain Monte Carlo)进行高效的后验计算。我们将这一方法应用于对巴西亚马逊边境地区疟疾风险随时间变化的空间明确研究。
Characterizing the shared memberships of individuals in a classification scheme poses severe interpretability issues, even when using a moderate number of classes (say 4). Mixed membership models quantify this phenomenon, but they typically focus on goodness-of-fit more than on interpretable inference. To achieve a good numerical fit, these models may in fact require many extreme profiles, making the results difficult to interpret. We introduce a new class of multivariate mixed membership models that, when variables can be partitioned into subject-matter based domains, can provide a good fit to the data using fewer profiles than standard formulations. The proposed model explicitly accounts for the blocks of variables corresponding to the distinct domains along with a cross-domain correlation structure, which provides new information about shared membership of individuals in a complex classification scheme. We specify a multivariate logistic normal distribution for the membership vectors, which allows easy introduction of auxiliary information leveraging a latent multivariate logistic regression. A Bayesian approach to inference, relying on Pólya gamma data augmentation, facilitates efficient posterior computation via Markov Chain Monte Carlo. We apply this methodology to a spatially explicit study of malaria risk over time on the Brazilian Amazon frontier.
期刊介绍:
Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance.
Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.