{"title":"RNA结构分类系统CSNA在核磁共振结构测定中的应用。","authors":"Seiki Baba, Akitsugu Takasu, Kimitsuna Watanabe, Gota Kawai","doi":"10.1093/nass/3.1.127","DOIUrl":null,"url":null,"abstract":"<p><p>CSNA is a computer system which classifies a set of RNA structures based on their structural characters; hydrogen bond and base-base stacking. CSNA has been applied to the RNA structure determination by NMR and it was found that CSNA could provide well converged groups as the lowest energy structures. Here, we further applied CSNA to the structure determination of a 31mer RNA forming a psuedoknot structure. It was demonstrated that CSNA is a useful tool for the RNA structure determination by NMR.</p>","PeriodicalId":86149,"journal":{"name":"Nucleic acids research. Supplement (2001)","volume":" 3","pages":"127-8"},"PeriodicalIF":0.0000,"publicationDate":"2003-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1093/nass/3.1.127","citationCount":"2","resultStr":"{\"title\":\"Application of the RNA structure classification system, CSNA, to NMR structure determination.\",\"authors\":\"Seiki Baba, Akitsugu Takasu, Kimitsuna Watanabe, Gota Kawai\",\"doi\":\"10.1093/nass/3.1.127\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>CSNA is a computer system which classifies a set of RNA structures based on their structural characters; hydrogen bond and base-base stacking. CSNA has been applied to the RNA structure determination by NMR and it was found that CSNA could provide well converged groups as the lowest energy structures. Here, we further applied CSNA to the structure determination of a 31mer RNA forming a psuedoknot structure. It was demonstrated that CSNA is a useful tool for the RNA structure determination by NMR.</p>\",\"PeriodicalId\":86149,\"journal\":{\"name\":\"Nucleic acids research. Supplement (2001)\",\"volume\":\" 3\",\"pages\":\"127-8\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2003-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://sci-hub-pdf.com/10.1093/nass/3.1.127\",\"citationCount\":\"2\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Nucleic acids research. Supplement (2001)\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1093/nass/3.1.127\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Nucleic acids research. Supplement (2001)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1093/nass/3.1.127","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Application of the RNA structure classification system, CSNA, to NMR structure determination.
CSNA is a computer system which classifies a set of RNA structures based on their structural characters; hydrogen bond and base-base stacking. CSNA has been applied to the RNA structure determination by NMR and it was found that CSNA could provide well converged groups as the lowest energy structures. Here, we further applied CSNA to the structure determination of a 31mer RNA forming a psuedoknot structure. It was demonstrated that CSNA is a useful tool for the RNA structure determination by NMR.
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