用于预测HLA-B27表达的基于机器学习的列线图的开发和验证。

IF 2.9 4区 医学 Q3 IMMUNOLOGY BMC Immunology Pub Date : 2023-09-26 DOI:10.1186/s12865-023-00566-z
Jichong Zhu, Weiming Tan, Xinli Zhan, Qing Lu, Tuo Liang, JieJiang, Hao Li, Chenxing Zhou, Shaofeng Wu, Tianyou Chen, Yuanlin Yao, Shian Liao, Chaojie Yu, Liyi Chen, Chong Liu
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摘要

背景:HLA-B27阳性在风湿性疾病患者中是正常的。许多疾病的诊断需要进行HLA-B27检查。方法:对广西医科大学第一附属医院1503例患者进行了HLA-B27检测、肝肾功能检查和血常规检查。训练队列包括509例HLA-B27阳性病例,而611例HLA-B28阴性病例。此外,验证队列包括147例HLA-B27阳性病例,而236例HLA-B28阴性病例。本研究采用LASSO、支持向量机递归特征消除和随机森林三种ML方法对特征变量进行筛选。随后,为了获取预测模型,选择交叉点。最后,对148例强直性脊柱炎(AS)HLA-B27阳性和阴性患者的差异进行了研究。结果:选择红细胞计数、人主要相容性复合体、平均血小板体积、白蛋白/球蛋白比(ALB/GLB)、前白蛋白和碳酸氢根6个因素,目的是用ML方法构建诊断列线图。对于训练队列,列线图曲线的曲线下面积(AUC)值为0.8254496,模型的C值为0.825。此外,验证队列的列线图C-值为0.853,AUC值为0.852675。此外,在HLA-B27阳性病例和AS病例中,ALB/GLB显著降低。结论:所提出的ML模型可以有效预测HLA-B27,有助于医生诊断各种免疫性疾病。
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Development and validation of a machine learning-based nomogram for predicting HLA-B27 expression.

Background: HLA-B27 positivity is normal in patients undergoing rheumatic diseases. The diagnosis of many diseases requires an HLA-B27 examination.

Methods: This study screened totally 1503 patients who underwent HLA-B27 examination, liver/kidney function tests, and complete blood routine examination in First Affiliated Hospital of Guangxi Medical University. The training cohort included 509 cases with HLA-B27 positivity whereas 611 with HLA-B27 negativity. In addition, validation cohort included 147 cases with HLA-B27 positivity whereas 236 with HLA-B27 negativity. In this study, 3 ML approaches, namely, LASSO, support vector machine (SVM) recursive feature elimination and random forest, were adopted for screening feature variables. Subsequently, to acquire the prediction model, the intersection was selected. Finally, differences among 148 cases with HLA-B27 positivity and negativity suffering from ankylosing spondylitis (AS) were investigated.

Results: Six factors, namely red blood cell count, human major compatibility complex, mean platelet volume, albumin/globulin ratio (ALB/GLB), prealbumin, and bicarbonate radical, were chosen with the aim of constructing the diagnostic nomogram using ML methods. For training queue, nomogram curve exhibited the value of area under the curve (AUC) of 0.8254496, and C-value of the model was 0.825. Moreover, nomogram C-value of the validation queue was 0.853, and the AUC value was 0.852675. Furthermore, a significant decrease in the ALB/GLB was noted among cases with HLA-B27 positivity and AS cases.

Conclusion: To conclude, the proposed ML model can effectively predict HLA-B27 and help doctors in the diagnosis of various immune diseases.

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来源期刊
BMC Immunology
BMC Immunology 医学-免疫学
CiteScore
5.50
自引率
0.00%
发文量
54
审稿时长
1 months
期刊介绍: BMC Immunology is an open access journal publishing original peer-reviewed research articles in molecular, cellular, tissue-level, organismal, functional, and developmental aspects of the immune system as well as clinical studies and animal models of human diseases.
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