使用移动研究实验室鉴定德克萨斯州Rolling Plains的北方白腹鹌鹑(Colinus virginianus)的眼虫(石油氧螺)和盲肠蠕虫(Aulonocephalus pennula)感染水平:对区域监测的意义。

Q1 Biochemistry, Genetics and Molecular Biology Biomolecular Detection and Quantification Pub Date : 2019-03-01 DOI:10.1016/j.bdq.2019.100092
Kendall R. Blanchard , Aravindan Kalyanasundaram , Cassandra Henry , Kelly A. Commons , Matthew Z. Brym , Kalin Skinner , James G. Surles , Ronald J. Kendall
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引用次数: 1

摘要

在过去的几十年里,北方白腹鹌鹑(Colinus virginianus)在其整个原生范围内数量有所减少。虽然有各种因素可能会影响这种下降,但建议将寄生虫视为滚动平原生态区的潜在贡献者。该地区bobwhite的眼虫(石油氧化螺)和盲肠虫(三角锥虫)的高流行率,加上持续下降,需要通过区域监测的替代方法来评估感染情况。先前的研究已经开发了qPCR方法和移动研究实验室,作为非致命程序的一种选择。然而,这些技术仍然需要标准化。因此,本研究以先前的方案为基础,开发了一种考虑可能影响qPCR结果的因素的应用程序。在这项研究中,从整个滚动平原的三个地点的山猫身上采集了泄殖腔拭子,并根据拭子上的粪便量进行了缩放。将该数据与qPCR标准进行比较,作为眼镜虫和盲肠虫的定量限度,以确定寄生虫感染水平。二元逻辑回归证实,随着拭子得分的增加,眼镜虫(比值比:2.3738;95%置信区间:[1.7804,3.1649])和盲肠蠕虫(比值比∶2.8516;95%置信间隔:[2.22353.6570])的检测概率都会增加。眼丝虫和盲肠蠕虫的感染水平基于qPCR标准的生成周期阈值平均值。基于这项研究的结果,该方法可应用于移动研究实验室,以定量评估整个滚动平原地区山猫的区域寄生虫感染情况。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Identification of eyeworm (Oxyspirura petrowi) and caecal worm (Aulonocephalus pennula) infection levels in Northern bobwhite quail (Colinus virginianus) of the Rolling Plains, TX using a mobile research laboratory: Implications for regional surveillance

Over the last few decades, there has been a decline in Northern bobwhite quail (Colinus virginianus) throughout their native range. While there are various factors that may be influencing this decline, it is suggested that parasites should be taken into consideration as a potential contributor in the Rolling Plains Ecoregion. High prevalence of the eyeworm (Oxyspirura petrowi) and caecal worm (Aulonocephalus pennula) in bobwhite of this region, coupled with a continuous decline, creates a need to assess infection through alternative methods for regional surveillance. Previous studies have developed a qPCR method and mobile research laboratory as an option for nonlethal procedures. However, there is still a need for standardization of these techniques. Therefore, this study builds on previous protocols to develop an application that considers factors that may influence qPCR results. In this study, cloacal swabs are collected from bobwhite in three locations throughout the Rolling Plains and scaled based on amount of feces present on the swab. This data is compared to qPCR standards as a limit of quantification for both eyeworm and caecal worm to define parasitic infection levels. Binary logistic regressions confirm that the probability of detection increases for both eyeworm (Odds Ratio: 2.3738; 95% Confidence Interval: [1.7804, 3.1649]) and caecal worm (Odds Ratio: 2.8516; 95% Confidence Interval: [2.2235, 3.6570]) as swab score increases. Infection levels for eyeworm and caecal worm are based on the generated cycle threshold value averages of qPCR standards. Based on the results of this study, this method can be applied in the mobile research laboratory to quantitatively assess regional parasitic infection in bobwhite throughout the Rolling Plains.

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来源期刊
Biomolecular Detection and Quantification
Biomolecular Detection and Quantification Biochemistry, Genetics and Molecular Biology-Biochemistry
CiteScore
14.20
自引率
0.00%
发文量
0
审稿时长
8 weeks
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