利用IonSolvR和等变图神经网络电位预测高通量水电解质结构。

IF 4.8 2区 化学 Q2 CHEMISTRY, PHYSICAL The Journal of Physical Chemistry Letters Pub Date : 2023-10-16 DOI:10.1021/acs.jpclett.3c01783
Sophie Baker, Joshua Pagotto, Timothy T. Duignan and Alister J. Page*, 
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引用次数: 0

摘要

神经网络势最近成为一种有效而准确的工具,用于加速从头计算分子动力学(AIMD),以模拟复杂的凝聚相,如电解质溶液。然而,它们的主要限制是它们需要足够大和准确的训练集,这些训练集通常由Kohn-Sham密度泛函理论(DFT)计算组成。在这里,我们检查了使用IonSolvR数据库中现有的密度泛函紧密结合(DFTB)分子动力学轨迹数据的可行性,以加速E(3)-等变图神经网络电位的训练。我们表明,Na+和Cl-在NaCl水溶液中的溶剂化结构可以用非常少量的数据(即100 MD帧)准确地再现。我们进一步证明,这些预测可以通过令人尴尬的并行重采样方法得到系统的进一步改进。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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High-Throughput Aqueous Electrolyte Structure Prediction Using IonSolvR and Equivariant Graph Neural Network Potentials

Neural network potentials have recently emerged as an efficient and accurate tool for accelerating ab initio molecular dynamics (AIMD) in order to simulate complex condensed phases such as electrolyte solutions. Their principal limitation, however, is their requirement for sufficiently large and accurate training sets, which are often composed of Kohn–Sham density functional theory (DFT) calculations. Here we examine the feasibility of using existing density functional tight-binding (DFTB) molecular dynamics trajectory data available in the IonSolvR database in order to accelerate the training of E(3)-equivariant graph neural network potentials. We show that the solvation structure of Na+ and Cl in aqueous NaCl solutions can be accurately reproduced with remarkably small amounts of data (i.e., 100 MD frames). We further show that these predictions can be systematically improved further via an embarrassingly parallel resampling approach.

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来源期刊
The Journal of Physical Chemistry Letters
The Journal of Physical Chemistry Letters CHEMISTRY, PHYSICAL-NANOSCIENCE & NANOTECHNOLOGY
CiteScore
9.60
自引率
7.00%
发文量
1519
审稿时长
1.6 months
期刊介绍: The Journal of Physical Chemistry (JPC) Letters is devoted to reporting new and original experimental and theoretical basic research of interest to physical chemists, biophysical chemists, chemical physicists, physicists, material scientists, and engineers. An important criterion for acceptance is that the paper reports a significant scientific advance and/or physical insight such that rapid publication is essential. Two issues of JPC Letters are published each month.
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