从淡水和土壤中分离的嗜冷黄杆菌和巴拿马黄杆菌。

IF 4.3 3区 材料科学 Q1 ENGINEERING, ELECTRICAL & ELECTRONIC ACS Applied Electronic Materials Pub Date : 2023-10-01 Epub Date: 2023-10-18 DOI:10.1007/s12275-023-00081-1
Yong-Seok Kim, Eun-Mi Hwang, Chang-Myeong Jeong, Chang-Jun Cha
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引用次数: 0

摘要

从汉江淡水和韩国人参土中分离得到两株黄杆菌属新菌株CJ74T和CJ75T。菌株CJ74T为革兰氏阴性,需氧,杆状,不活动,无鞭毛,不产生柔红霉素型色素。菌株CJ75T为革兰氏阴性,需氧,杆状,能滑翔运动,无鞭毛,可产生柔红霉素型色素。在R2A培养基上没有NaCl的情况下,这两种菌株都能在30°C下最佳生长。基于16S rRNA基因序列的系统发育分析表明,菌株CJ74T和CJ75T属于黄杆菌属,与雪腐黄杆菌TAPW14T和烟腐黄杆菌CJ42T的亲缘关系最为密切,16S rNA序列相似性分别为96.17%和97.29%。基因组分析,包括系统发育树的重建、平均核苷酸同一性和数字DNA-DNA杂交,表明它们是黄杆菌属的新种。这两个菌株都含有作为主要呼吸醌的甲基萘醌6(MK-6)和作为主要极性脂质的磷脂酰乙醇胺。两个菌株的主要脂肪酸是异C15:0和总特征3(C16:1ω7c和/或C16:1Ω6c)。在多相分类学研究的基础上,菌株CJ74T和CJ75T代表了黄杆菌属的新种,分别命名为黄杆菌(Flavobacterium psychrotrophum sp.nov.)和巴拿马黄杆菌(flavobacterum panacagri sp.nov)。类型菌株为CJ74T(=KACC 19819T =JCM 32889T)和CJ75T(=KACC 23149T =JCM 36132T)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Flavobacterium psychrotrophum sp. nov. and Flavobacterium panacagri sp. nov., Isolated from Freshwater and Soil.

Two novel bacterial strains CJ74T and CJ75T belonging to the genus Flavobacterium were isolated from freshwater of Han River and ginseng soil, South Korea, respectively. Strain CJ74T was Gram-stain-negative, aerobic, rod-shaped, non-motile, and non-flagellated, and did not produce flexirubin-type pigments. Strain CJ75T was Gram-stain-negative, aerobic, rod-shaped, motile by gliding, and non-flagellated, and produced flexirubin-type pigments. Both strains were shown to grow optimally at 30 °C in the absence of NaCl on R2A medium. Phylogenetic analysis based on 16S rRNA gene sequences showed that strains CJ74T and CJ75T belonged to the genus Flavobacterium and were most closely related to Flavobacterium niveum TAPW14T and Flavobacterium foetidum CJ42T with 96.17% and 97.29% 16S rRNA sequence similarities, respectively. Genomic analyses including the reconstruction of phylogenomic tree, average nucleotide identity, and digital DNA-DNA hybridization suggested that they were novel species of the genus Flavobacterium. Both strains contained menaquinone 6 (MK-6) as the primary respiratory quinone and phosphatidylethanolamine as a major polar lipid. The predominant fatty acids of both strains were iso-C15:0 and summed feature 3 (C16:1 ω7c and/or C16:1 ω6c). Based on the polyphasic taxonomic study, strains CJ74T and CJ75T represent novel species of the genus Flavobacterium, for which names Flavobacterium psychrotrophum sp. nov. and Flavobacterium panacagri sp. nov. are proposed, respectively. The type strains are CJ74T (=KACC 19819T =JCM 32889T) and CJ75T (=KACC 23149T =JCM 36132T).

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