三角Talinum triangular(Jacq.)野生种质的DNA条形码分子鉴定

E. Nya, I. Uffia, Godwin Elijah, M. Eka, Lucy Owoh
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引用次数: 0

摘要

三角Talinum triangular(Jacq.)Willd是热带雨林农业生态区广泛种植的蔬菜。它长到大约10-100厘米高,开粉红色的小花,有些开白色到浅紫色的花,有肉质的浅绿色到森林绿色的叶子,根肿胀。它是尼日利亚南部和喀麦隆普遍喜欢的叶菜之一,在那里它被用于浓汤和增加炖菜体积的添加剂。它现在作为药用植物和香料在全世界引起了极大的兴趣。以前,我们已经对这种植物种质进行了形态学表征,但我们报道的关于该植物遗传和分子特征的信息很少。本研究旨在对三角Talinum triangular种质的不同陆地小种进行分子表征,以描述可用陆地小种的遗传信息/性状。Talinum triangular的不同陆地种族来自尼日利亚的不同地区,包括与喀麦隆共和国接壤的Uyo、AkwaIbom州。这项研究工作是在尼日利亚伊巴丹国际热带农业研究所实验室进行的。从不同的Talinum样品中分离出高质量的总DNA,并进行定量和纯度交叉检查。使用不同的引物(核糖二磷酸羧化酶rbcL、trnH-psbA基因间间隔区trn-H-sbA、成熟酶K-matK、核内转录间隔区ITS)和DNA条形码技术对基因组DNA样品进行PCR扩增。进行凝胶电泳,并对完整DNA的片段进行凝胶洗脱,对扩增子进行测序,并使用Basic局部比对搜索工具BLAST验证序列同源性。然而,在Talinum样本中没有检测到差异,这表明陆地种族在基因型上是相同的,并且观察到的表型差异总是由于环境造成的。
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Molecular Characterization of Talinum triangulare (Jacq.)Wild Germplasm Using DNA Barcoding Method
Talinum triangulare (Jacq.) Willd is extensively cultivated vegetable in the agro-ecological zone of the tropical rainforest. It grows to the height of about 10-100 cm tall, bearing small pink flowers, some with white to light purple flowers and with fleshy light green to forest green leaves with swollen roots. It is one of the commonly preferred leafy vegetables in southern Nigeria and Cameroon, where it is used in thickening of soup and as additive in increasing the bulk of stews. It is now attracting considerable interest worldwide as medicinal plant and spice. Previously, we have carried out the morphological characterization of this plant germplasm, where we reported paucity of information on the genetics and molecular characteristics of the plant. This present study aimed at carrying out molecular characterization of different land races of Talinum triangulare germplasm with a view to describing the genetic information / traits of the available land races. The different land races of Talinum triangulare were collected from different part of Nigeria including Uyo, AkwaIbom State bordering Cameroon republic. The research work was carried out at International Institute of Tropical Agriculture Laboratory, IITA, Ibadan, Nigeria. High quality total DNA was isolated from the different Talinumsamples, quantified and cross examined for purity. The genomic DNA samples were treated to PCR amplification using different primers (ribulosebisphosphatecarboxylase rbcL, trnH-psbA intergenic spacer trn H-psbA, maturase K matK, nuclear internal transcribed spacer ITS) and DNAbarcoding technique. Gel electrophoresis was performed and the fragment of the intact DNAi.e. the amplicons was gel eluted, subjected to sequencing and the Basic local alignment search tool BLAST were carry out to verify the sequence homology. Nevertheless, no difference was detected among the Talinum samples, signifying that the land races were genotypically identical and that the phenotypical differences observed were invariably due to environments.
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