Noctuini的分子系统发育(鳞翅目:Noctuinae)

IF 3.2 1区 农林科学 Q1 ENTOMOLOGY Insect Systematics and Diversity Pub Date : 2023-05-01 DOI:10.1093/isd/ixad009
Melissa S Sisson, Matthew J Flom, Janna L Crossley, Rebecca Simmons
{"title":"Noctuini的分子系统发育(鳞翅目:Noctuinae)","authors":"Melissa S Sisson, Matthew J Flom, Janna L Crossley, Rebecca Simmons","doi":"10.1093/isd/ixad009","DOIUrl":null,"url":null,"abstract":"\n The tribe Noctuini is comprised over 520 species; many are economically important species that impact human agriculture. Despite their diversity and relevance, relationships of Noctuini have been difficult to resolve. There have been extensive morphological revisions of some of these taxa (e.g., Agrotis Ochsenheimer, Euxoa Hübner); however, there are no studies that focus exclusively on the phylogenetic relationships of the Noctuini. Currently, Noctuini are separated into 2 subtribes, Agrotina and Noctuina. In this study, we tested previous classification schemes with 2 analyses. The total evidence analysis utilized 3 loci for 3 outgroup taxa and 54 noctuine species. Using museum specimens, we collected data from cytochrome oxidase I (COI), Dopa Decarboxylase (DDC), and Elongation factor 1-α (EF1-α) to generate a dataset of 1,378 base pairs (bp) for a total evidence approach. We also used previously published COI sequences for 626 species, resulting in a matrix of 690 bp, termed “the barcode analysis.” We used both Maximum Likelihood and Bayesian approaches for the total evidence analysis, and ML for the barcode analysis. In both sets of results, we found equivocal support for monophyletic Agrotina and Noctuina. We found strong support for smaller, well-described genera (e.g., Spaelotis), but poor support for large genera such as Euxoa, Feltia Walker, and Agrotis. It is likely that a combination of limited taxon/gene sampling, limited gene choice, and the rapid evolution of these species resulted in a lack of phylogenetic resolution in the total evidence topologies. Based on these results, we recommend increased taxon sampling and inclusion of loci that target these rapidly evolving lineages to achieve a better understanding of the phylogeny of Noctuini and its genera.","PeriodicalId":48498,"journal":{"name":"Insect Systematics and Diversity","volume":" ","pages":""},"PeriodicalIF":3.2000,"publicationDate":"2023-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"A molecular phylogeny of Noctuini (Lepidoptera: Noctuidae: Noctuinae)\",\"authors\":\"Melissa S Sisson, Matthew J Flom, Janna L Crossley, Rebecca Simmons\",\"doi\":\"10.1093/isd/ixad009\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"\\n The tribe Noctuini is comprised over 520 species; many are economically important species that impact human agriculture. Despite their diversity and relevance, relationships of Noctuini have been difficult to resolve. There have been extensive morphological revisions of some of these taxa (e.g., Agrotis Ochsenheimer, Euxoa Hübner); however, there are no studies that focus exclusively on the phylogenetic relationships of the Noctuini. Currently, Noctuini are separated into 2 subtribes, Agrotina and Noctuina. In this study, we tested previous classification schemes with 2 analyses. The total evidence analysis utilized 3 loci for 3 outgroup taxa and 54 noctuine species. Using museum specimens, we collected data from cytochrome oxidase I (COI), Dopa Decarboxylase (DDC), and Elongation factor 1-α (EF1-α) to generate a dataset of 1,378 base pairs (bp) for a total evidence approach. We also used previously published COI sequences for 626 species, resulting in a matrix of 690 bp, termed “the barcode analysis.” We used both Maximum Likelihood and Bayesian approaches for the total evidence analysis, and ML for the barcode analysis. In both sets of results, we found equivocal support for monophyletic Agrotina and Noctuina. We found strong support for smaller, well-described genera (e.g., Spaelotis), but poor support for large genera such as Euxoa, Feltia Walker, and Agrotis. It is likely that a combination of limited taxon/gene sampling, limited gene choice, and the rapid evolution of these species resulted in a lack of phylogenetic resolution in the total evidence topologies. Based on these results, we recommend increased taxon sampling and inclusion of loci that target these rapidly evolving lineages to achieve a better understanding of the phylogeny of Noctuini and its genera.\",\"PeriodicalId\":48498,\"journal\":{\"name\":\"Insect Systematics and Diversity\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":3.2000,\"publicationDate\":\"2023-05-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Insect Systematics and Diversity\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1093/isd/ixad009\",\"RegionNum\":1,\"RegionCategory\":\"农林科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"ENTOMOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Insect Systematics and Diversity","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1093/isd/ixad009","RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"ENTOMOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

Noctuini部落由520多个物种组成;许多是影响人类农业的重要经济物种。尽管它们的多样性和相关性,夜之夜的关系一直难以解决。对其中一些分类群(如Agrotis Ochsenheimer, Euxoa h bner)进行了广泛的形态修改;然而,目前还没有专门研究Noctuini的系统发育关系。目前,夜莺被分为2个亚族,Agrotina和Noctuina。在本研究中,我们用2个分析测试了以前的分类方案。总证据分析利用3个位点对3个外群分类群和54个夜景种进行分析。利用博物馆标本,我们收集了细胞色素氧化酶I (COI)、多巴脱羧酶(DDC)和延伸因子1-α (EF1-α)的数据,生成了1378个碱基对(bp)的数据集。我们还使用了先前发表的626个物种的COI序列,得到了一个690 bp的矩阵,称为“条形码分析”。我们使用最大似然和贝叶斯方法进行总证据分析,并使用ML进行条形码分析。在这两组结果中,我们发现对单系草属和夜菇属的模棱两可的支持。我们发现对较小的、描述良好的属(如Spaelotis)的支持度很高,但对大型属(如Euxoa、Feltia Walker和Agrotis)的支持度很低。这可能是由于有限的分类群/基因采样、有限的基因选择和这些物种的快速进化的结合,导致在总证据拓扑结构中缺乏系统发育分辨率。基于这些结果,我们建议增加分类群采样,并纳入针对这些快速进化谱系的基因座,以更好地了解Noctuini及其属的系统发育。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
A molecular phylogeny of Noctuini (Lepidoptera: Noctuidae: Noctuinae)
The tribe Noctuini is comprised over 520 species; many are economically important species that impact human agriculture. Despite their diversity and relevance, relationships of Noctuini have been difficult to resolve. There have been extensive morphological revisions of some of these taxa (e.g., Agrotis Ochsenheimer, Euxoa Hübner); however, there are no studies that focus exclusively on the phylogenetic relationships of the Noctuini. Currently, Noctuini are separated into 2 subtribes, Agrotina and Noctuina. In this study, we tested previous classification schemes with 2 analyses. The total evidence analysis utilized 3 loci for 3 outgroup taxa and 54 noctuine species. Using museum specimens, we collected data from cytochrome oxidase I (COI), Dopa Decarboxylase (DDC), and Elongation factor 1-α (EF1-α) to generate a dataset of 1,378 base pairs (bp) for a total evidence approach. We also used previously published COI sequences for 626 species, resulting in a matrix of 690 bp, termed “the barcode analysis.” We used both Maximum Likelihood and Bayesian approaches for the total evidence analysis, and ML for the barcode analysis. In both sets of results, we found equivocal support for monophyletic Agrotina and Noctuina. We found strong support for smaller, well-described genera (e.g., Spaelotis), but poor support for large genera such as Euxoa, Feltia Walker, and Agrotis. It is likely that a combination of limited taxon/gene sampling, limited gene choice, and the rapid evolution of these species resulted in a lack of phylogenetic resolution in the total evidence topologies. Based on these results, we recommend increased taxon sampling and inclusion of loci that target these rapidly evolving lineages to achieve a better understanding of the phylogeny of Noctuini and its genera.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
5.30
自引率
8.80%
发文量
34
期刊最新文献
Reviewers for Insect Systematics and Diversity (November 2022–October 2023) Building a community-based taxonomic resource for digitization of parasites and their hosts Across mountains and ocean: species delimitation and historical connectivity in Holarctic and Arctic-Alpine wolf spiders (Lycosidae, Pardosa) Jumping to new hosts: the diversification of flea beetles (Coleoptera: Chrysomelidae: Alticini) in the context of their host plant associations Comparative anatomy of venom glands suggests a role of maternal secretions in gall induction by cynipid wasps (Hymenoptera: Cynipidae)
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1