海南鼹鼠新的线粒体基因组及其分子生物学意义

IF 0.8 4区 生物学 Q3 ZOOLOGY Mammal Study Pub Date : 2021-09-16 DOI:10.3106/ms2021-0008
F. Tu, Xiaofei Zhai, Wenjing Zhao, Jichao Wang
{"title":"海南鼹鼠新的线粒体基因组及其分子生物学意义","authors":"F. Tu, Xiaofei Zhai, Wenjing Zhao, Jichao Wang","doi":"10.3106/ms2021-0008","DOIUrl":null,"url":null,"abstract":"Abstract. The Hainan mole Mogera hainana was described as a full species by Thomas (1910), but its taxonomic status of this animal has been debated since then and remains controversial. In this study, we determined the mitochondrial genome of M. hainana. We also estimated its phylogenetic relationships using mitochondrial Cytb and nuclear Rag1 genes and conducted molecular species delimitation analyses using Bayesian Poisson tree processes, Automatic Barcode Gap Discovery, and Assemble Species by Automatic Partitioning to determine the evolutionary position and putative taxonomic status of M. hainana. The mitogenome of M. hainana is 16 845 base pairs, composed of 13 protein-coding genes, 22 tRNAs, two rRNAs, and the control region. We further compared this sequence with those of other Mogera species. The phylogenetic trees support a sister relationship between M. hainana and M. kanoana and close relationships among M. hainana, M. kanoana, M. insularis, and M. latouchei. Species delimitation analyses suggest that M. hainana is distinct from other recognized species and thus is likely a distinct species.","PeriodicalId":49891,"journal":{"name":"Mammal Study","volume":null,"pages":null},"PeriodicalIF":0.8000,"publicationDate":"2021-09-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"New Mitogenome of the Hainan Mole Mogera hainana and Taxonomic Implications Based on Molecular Data\",\"authors\":\"F. Tu, Xiaofei Zhai, Wenjing Zhao, Jichao Wang\",\"doi\":\"10.3106/ms2021-0008\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Abstract. The Hainan mole Mogera hainana was described as a full species by Thomas (1910), but its taxonomic status of this animal has been debated since then and remains controversial. In this study, we determined the mitochondrial genome of M. hainana. We also estimated its phylogenetic relationships using mitochondrial Cytb and nuclear Rag1 genes and conducted molecular species delimitation analyses using Bayesian Poisson tree processes, Automatic Barcode Gap Discovery, and Assemble Species by Automatic Partitioning to determine the evolutionary position and putative taxonomic status of M. hainana. The mitogenome of M. hainana is 16 845 base pairs, composed of 13 protein-coding genes, 22 tRNAs, two rRNAs, and the control region. We further compared this sequence with those of other Mogera species. The phylogenetic trees support a sister relationship between M. hainana and M. kanoana and close relationships among M. hainana, M. kanoana, M. insularis, and M. latouchei. Species delimitation analyses suggest that M. hainana is distinct from other recognized species and thus is likely a distinct species.\",\"PeriodicalId\":49891,\"journal\":{\"name\":\"Mammal Study\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.8000,\"publicationDate\":\"2021-09-16\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Mammal Study\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.3106/ms2021-0008\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"ZOOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Mammal Study","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.3106/ms2021-0008","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"ZOOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

摘要海南鼹鼠Mogera hainana被Thomas(1910)描述为一个完整的物种,但从那时起,它对这种动物的分类地位一直存在争议,至今仍有争议。在本研究中,我们确定了海南M.hainana的线粒体基因组。我们还使用线粒体Cytb和细胞核Rag1基因估计了其系统发育关系,并使用贝叶斯泊松树过程、自动条形码间隙发现和通过自动划分组装物种进行了分子物种划界分析,以确定M.hainana的进化位置和假定的分类地位。海南M.hainana的有丝分裂基因组是16445个碱基对,由13个蛋白质编码基因、22个tRNA、两个rRNA和对照区组成。我们进一步将该序列与其他莫盖拉物种的序列进行了比较。系统发育树支持M.hainana和M.kanoana之间的姐妹关系,以及M.hainan、M.kanoaana、M.islandis和M.latouchei之间的密切关系。物种划界分析表明,M.hainana与其他公认物种不同,因此很可能是一个不同的物种。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
New Mitogenome of the Hainan Mole Mogera hainana and Taxonomic Implications Based on Molecular Data
Abstract. The Hainan mole Mogera hainana was described as a full species by Thomas (1910), but its taxonomic status of this animal has been debated since then and remains controversial. In this study, we determined the mitochondrial genome of M. hainana. We also estimated its phylogenetic relationships using mitochondrial Cytb and nuclear Rag1 genes and conducted molecular species delimitation analyses using Bayesian Poisson tree processes, Automatic Barcode Gap Discovery, and Assemble Species by Automatic Partitioning to determine the evolutionary position and putative taxonomic status of M. hainana. The mitogenome of M. hainana is 16 845 base pairs, composed of 13 protein-coding genes, 22 tRNAs, two rRNAs, and the control region. We further compared this sequence with those of other Mogera species. The phylogenetic trees support a sister relationship between M. hainana and M. kanoana and close relationships among M. hainana, M. kanoana, M. insularis, and M. latouchei. Species delimitation analyses suggest that M. hainana is distinct from other recognized species and thus is likely a distinct species.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Mammal Study
Mammal Study ZOOLOGY-
CiteScore
1.70
自引率
20.00%
发文量
23
审稿时长
>12 weeks
期刊介绍: Mammal Study is the official journal of the Mammal Society of Japan. It publishes original articles, short communications, and reviews on all aspects of mammalogy quarterly, written in English.
期刊最新文献
Flight distance of sika deer under low anthropogenic disturbance in Japan Feeding Habits of Japanese Serow in a Warm–Temperate, Low-Elevation, Evergreen Broad-Leaved Shrub-Dominated Forest Differences in Tick Infestation Intensity by Season, Sex, Age Class, and Body Region of Feral Raccoons (Procyon lotor) in the Miura Peninsula, Japan Cage it or Drop it: Comparison of Methods for Capturing Wild Goats (Capra aegagrus) Remains of a Fin Whale from Osaka, Japan, and Comparison of Baleen Whale Cases in the Past and Present of Osaka Bay (The Seto Inland Sea)
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1