个性化医学:测序技术在单因素和多因素疾病诊断、预测和治疗选择中的作用

Q3 Agricultural and Biological Sciences Biological Communications Pub Date : 2022-12-31 DOI:10.21638/spbu03.2022.403
O. Glotov, A. Chernov, Michael Fedyakov, V. Larionova, A. Zaretsky, M. Donnikov, A. Glotov
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引用次数: 0

摘要

这篇综述强调了破译核酸核苷酸序列(测序)的各种方法,以及它们对实现个性化医学的三个主要原则的重要性:预防、可预测性和个性化。这篇综述,连同它自己的实际例子,考虑了三代测序技术:1)根据Sanger及其类似物对克隆或扩增的DNA片段进行测序;2) 短读DNA文库的大规模平行测序(NGS);和3)具有长读数的DNA和RNA的单个分子的测序。还讨论了全基因组、全外显子组、靶向、RNA测序和基于染色质免疫沉淀的测序方法。讨论了上述方法在诊断单基因和肿瘤学疾病、识别风险因素和预测具有社会意义的多因素疾病病程方面的优势和局限性。通过临床实践的例子,展示了测序技术的应用和选择算法。由于测序技术的使用,现在有可能确定单基因、孤儿和多因素疾病发展的分子机制,了解这些机制对于个性化患者治疗是必要的。在科学领域,这些技术为国际基因组计划铺平了道路——人类基因组计划、HapMap、1000基因组计划、个性化基因组计划等。
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Personalized medicine: the role of sequencing technologies in diagnostics, prediction and selection of treatment of monogenous and multifactorial diseases
The review highlights various methods for deciphering the nucleotide sequence (sequencing) of nucleic acids and their importance for the implementation of the three main principles of personalized medicine: prevention, predictability and personalization. The review, along with its own practical examples, considers three generations of sequencing technologies: 1) sequencing of cloned or amplified DNA fragments according to Sanger and its analogues; 2) massive parallel sequencing of DNA libraries with short reads (NGS); and 3) sequencing of single molecules of DNA and RNA with long reads. The methods of whole genome, whole exome, targeted, RNA sequencing and sequencing based on chromatin immunoprecipitation are also discussed. The advantages and limitations of the above methods for diagnosing monogenic and oncological diseases, as well as for identifying risk factors and predicting the course of socially significant multifactorial diseases are discussed. Using examples from clinical practice, algorithms for the application and selection of sequencing technologies are demonstrated. As a result of the use of sequencing technologies, it has now become possible to determine the molecular mechanism of the development of monogenic, orphan and multifactorial diseases, the knowledge of which is necessary for personalized patient therapy. In science, these technologies paved the way for international genome projects — the Human Genome Project, the HapMap, 1000 Genomes Project, the Personalized Genome Project, etc.
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来源期刊
Biological Communications
Biological Communications Agricultural and Biological Sciences-Agricultural and Biological Sciences (all)
CiteScore
1.70
自引率
0.00%
发文量
21
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