稳定同位素轨迹分析(SITA):稳定同位素研究中量化和可视化动力学的新方法

IF 7.1 1区 环境科学与生态学 Q1 ECOLOGY Ecological Monographs Pub Date : 2021-12-16 DOI:10.1002/ecm.1501
Anthony Sturbois, Julien Cucherousset, Miquel De Cáceres, Nicolas Desroy, Pascal Riera, Alexandre Carpentier, Nolwenn Quillien, Jacques Grall, Boris Espinasse, Yves Cherel, Gauthier Schaal
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引用次数: 6

摘要

研究稳定同位素的生态学家必须处理复杂的数据集,包括时间和空间复制,这使得分析和表示变化模式具有挑战性,特别是在高分辨率下。由于稳定同位素生态学缺乏一个公认的概念框架,过去对生物或群落尺度稳定同位素值的时空动态分析和图形表示往往停留在描述性和定性的阶段,阻碍了相关功能模式的定量检测。最近的群落轨迹分析(CTA)框架为生态轨迹的分析和可视化提供了更明确的视角。在CTA的基础上,我们开发了稳定同位素轨迹分析(SITA)框架,分析了稳定同位素轨迹在n维(n≥2)空间上的几何性质,类似于群落生态学中使用的传统多元空间(Ω)。该方法为稳定同位素空间(Ωδ)和衍生的结构和功能动力学(Ωγ)的时空轨迹定量分析提供了新的视角。SITA允许计算一组基于轨迹距离或方向的轨迹度量,以及新的图形表示解决方案,两者都可以在R环境中轻松执行。在这里,我们通过重新分析以前发表的来自海洋、陆地和淡水生态系统的数据集来说明我们的方法的使用。我们强调了这一新的分析框架在个体、群体、社区和生态系统层面提供的见解,并讨论了应用、限制和发展潜力。
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Stable Isotope Trajectory Analysis (SITA): A new approach to quantify and visualize dynamics in stable isotope studies

Ecologists working with stable isotopes have to deal with complex datasets including temporal and spatial replication, which makes the analysis and the representation of patterns of change challenging, especially at high resolution. Due to the lack of a commonly accepted conceptual framework in stable isotope ecology, the analysis and the graphical representation of stable isotope spatial and temporal dynamics of stable isotope value at the organism or community scale remained in the past often descriptive and qualitative, impeding the quantitative detection of relevant functional patterns. The recent community trajectory analysis (CTA) framework provides more explicit perspectives for the analysis and the visualization of ecological trajectories. Building on CTA, we developed the Stable Isotope Trajectory Analysis (SITA) framework, to analyze the geometric properties of stable isotope trajectories on n-dimensional (n ≥ 2) spaces of analysis defined analogously to the traditional multivariate spaces (Ω) used in community ecology. This approach provides new perspectives into the quantitative analysis of spatio-temporal trajectories in stable isotope spaces (Ωδ) and derived structural and functional dynamics (Ωγ space). SITA allows the calculation of a set of trajectory metrics, based on either trajectory distances or directions, and new graphical representation solutions, both easily performable in an R environment. Here, we illustrate the use of our approach by reanalyzing previously published datasets from marine, terrestrial, and freshwater ecosystems. We highlight the insights provided by this new analytic framework at the individual, population, community, and ecosystems levels, and discuss applications, limitations, and development potential.

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来源期刊
Ecological Monographs
Ecological Monographs 环境科学-生态学
CiteScore
12.20
自引率
0.00%
发文量
61
审稿时长
3 months
期刊介绍: The vision for Ecological Monographs is that it should be the place for publishing integrative, synthetic papers that elaborate new directions for the field of ecology. Original Research Papers published in Ecological Monographs will continue to document complex observational, experimental, or theoretical studies that by their very integrated nature defy dissolution into shorter publications focused on a single topic or message. Reviews will be comprehensive and synthetic papers that establish new benchmarks in the field, define directions for future research, contribute to fundamental understanding of ecological principles, and derive principles for ecological management in its broadest sense (including, but not limited to: conservation, mitigation, restoration, and pro-active protection of the environment). Reviews should reflect the full development of a topic and encompass relevant natural history, observational and experimental data, analyses, models, and theory. Reviews published in Ecological Monographs should further blur the boundaries between “basic” and “applied” ecology. Concepts and Synthesis papers will conceptually advance the field of ecology. These papers are expected to go well beyond works being reviewed and include discussion of new directions, new syntheses, and resolutions of old questions. In this world of rapid scientific advancement and never-ending environmental change, there needs to be room for the thoughtful integration of scientific ideas, data, and concepts that feeds the mind and guides the development of the maturing science of ecology. Ecological Monographs provides that room, with an expansive view to a sustainable future.
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