Anthony Sturbois, Julien Cucherousset, Miquel De Cáceres, Nicolas Desroy, Pascal Riera, Alexandre Carpentier, Nolwenn Quillien, Jacques Grall, Boris Espinasse, Yves Cherel, Gauthier Schaal
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The recent community trajectory analysis (CTA) framework provides more explicit perspectives for the analysis and the visualization of ecological trajectories. Building on CTA, we developed the Stable Isotope Trajectory Analysis (SITA) framework, to analyze the geometric properties of stable isotope trajectories on n-dimensional (<i>n</i> ≥ 2) spaces of analysis defined analogously to the traditional multivariate spaces (Ω) used in community ecology. This approach provides new perspectives into the quantitative analysis of spatio-temporal trajectories in stable isotope spaces (Ω<sub>δ</sub>) and derived structural and functional dynamics (Ω<sub>γ</sub> space). SITA allows the calculation of a set of trajectory metrics, based on either trajectory distances or directions, and new graphical representation solutions, both easily performable in an R environment. Here, we illustrate the use of our approach by reanalyzing previously published datasets from marine, terrestrial, and freshwater ecosystems. 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Stable Isotope Trajectory Analysis (SITA): A new approach to quantify and visualize dynamics in stable isotope studies
Ecologists working with stable isotopes have to deal with complex datasets including temporal and spatial replication, which makes the analysis and the representation of patterns of change challenging, especially at high resolution. Due to the lack of a commonly accepted conceptual framework in stable isotope ecology, the analysis and the graphical representation of stable isotope spatial and temporal dynamics of stable isotope value at the organism or community scale remained in the past often descriptive and qualitative, impeding the quantitative detection of relevant functional patterns. The recent community trajectory analysis (CTA) framework provides more explicit perspectives for the analysis and the visualization of ecological trajectories. Building on CTA, we developed the Stable Isotope Trajectory Analysis (SITA) framework, to analyze the geometric properties of stable isotope trajectories on n-dimensional (n ≥ 2) spaces of analysis defined analogously to the traditional multivariate spaces (Ω) used in community ecology. This approach provides new perspectives into the quantitative analysis of spatio-temporal trajectories in stable isotope spaces (Ωδ) and derived structural and functional dynamics (Ωγ space). SITA allows the calculation of a set of trajectory metrics, based on either trajectory distances or directions, and new graphical representation solutions, both easily performable in an R environment. Here, we illustrate the use of our approach by reanalyzing previously published datasets from marine, terrestrial, and freshwater ecosystems. We highlight the insights provided by this new analytic framework at the individual, population, community, and ecosystems levels, and discuss applications, limitations, and development potential.
期刊介绍:
The vision for Ecological Monographs is that it should be the place for publishing integrative, synthetic papers that elaborate new directions for the field of ecology.
Original Research Papers published in Ecological Monographs will continue to document complex observational, experimental, or theoretical studies that by their very integrated nature defy dissolution into shorter publications focused on a single topic or message.
Reviews will be comprehensive and synthetic papers that establish new benchmarks in the field, define directions for future research, contribute to fundamental understanding of ecological principles, and derive principles for ecological management in its broadest sense (including, but not limited to: conservation, mitigation, restoration, and pro-active protection of the environment). Reviews should reflect the full development of a topic and encompass relevant natural history, observational and experimental data, analyses, models, and theory. Reviews published in Ecological Monographs should further blur the boundaries between “basic” and “applied” ecology.
Concepts and Synthesis papers will conceptually advance the field of ecology. These papers are expected to go well beyond works being reviewed and include discussion of new directions, new syntheses, and resolutions of old questions.
In this world of rapid scientific advancement and never-ending environmental change, there needs to be room for the thoughtful integration of scientific ideas, data, and concepts that feeds the mind and guides the development of the maturing science of ecology. Ecological Monographs provides that room, with an expansive view to a sustainable future.