模型和重新筑巢概率函数的选择影响鸟类季节生产力模型的行为及其人口预测

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Accounts of Chemical Research Pub Date : 2023-08-23 DOI:10.1111/ibi.13267
Patrick J. C. White, Chris Stoate, Nicholas J. Aebischer, John Szczur, Lucy Ferrer, Ken Norris
{"title":"模型和重新筑巢概率函数的选择影响鸟类季节生产力模型的行为及其人口预测","authors":"Patrick J. C. White,&nbsp;Chris Stoate,&nbsp;Nicholas J. Aebischer,&nbsp;John Szczur,&nbsp;Lucy Ferrer,&nbsp;Ken Norris","doi":"10.1111/ibi.13267","DOIUrl":null,"url":null,"abstract":"<p>Measuring seasonal productivity is difficult in multi-brooded species without labour-intensive ringing studies. Individual-based (IB) models have been used to estimate seasonal productivity with no direct knowledge of number of nesting attempts, but they are often based on simplified re-nesting probability (φ<sub><i>R</i></sub>) step-functions instead of observed or more biologically plausible ones. We present a new, open-source IB seasonal productivity model parameterized from studies of Black Redstart <i>Phoenicurus ochruros</i> and Yellowhammer <i>Emberiza citrinella</i>. We examined how the φ<sub><i>R</i></sub> function shape (empirical versus simplified) influenced (1) model performance, (2) re-nesting compensation and (3) population-level predictions of a simulated management intervention. Population-level predictions were made only for Yellowhammer as we had more detailed demographic data, such as survival rates, available. Pattern-oriented modelling revealed that IB models produced realistic within-population distributions of breeding parameters, and those specified with an observed or empirically derived φ<sub><i>R</i></sub> function generally outperformed those specified with simpler step functions. Strength of re-nesting compensation differed depending on the φ<sub><i>R</i></sub> function used. For Yellowhammers, type of φ<sub><i>R</i></sub> function in IB models marginally influenced population-level predictions of a simulated management intervention (potential population growth rate increased between 23% and 29% relative to no management intervention). In contrast, a simple deterministic productivity model, which did not simulate re-nesting compensation, predicted a 41% increase in potential population growth. At a population level, choice of φ<sub><i>R</i></sub> function may have less influence on IB model predictions, but choice of model itself (IB versus deterministic) may have substantial impact. We discuss how more biologically plausible φ<sub><i>R</i></sub> functions might either be observed directly, derived from nest data, or estimated from proxy information such as moult or brood patch changes.</p>","PeriodicalId":1,"journal":{"name":"Accounts of Chemical Research","volume":null,"pages":null},"PeriodicalIF":16.4000,"publicationDate":"2023-08-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/ibi.13267","citationCount":"0","resultStr":"{\"title\":\"Choice of model and re-nesting probability function influences behaviour of avian seasonal productivity models and their demographic predictions\",\"authors\":\"Patrick J. C. White,&nbsp;Chris Stoate,&nbsp;Nicholas J. Aebischer,&nbsp;John Szczur,&nbsp;Lucy Ferrer,&nbsp;Ken Norris\",\"doi\":\"10.1111/ibi.13267\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>Measuring seasonal productivity is difficult in multi-brooded species without labour-intensive ringing studies. Individual-based (IB) models have been used to estimate seasonal productivity with no direct knowledge of number of nesting attempts, but they are often based on simplified re-nesting probability (φ<sub><i>R</i></sub>) step-functions instead of observed or more biologically plausible ones. We present a new, open-source IB seasonal productivity model parameterized from studies of Black Redstart <i>Phoenicurus ochruros</i> and Yellowhammer <i>Emberiza citrinella</i>. We examined how the φ<sub><i>R</i></sub> function shape (empirical versus simplified) influenced (1) model performance, (2) re-nesting compensation and (3) population-level predictions of a simulated management intervention. Population-level predictions were made only for Yellowhammer as we had more detailed demographic data, such as survival rates, available. Pattern-oriented modelling revealed that IB models produced realistic within-population distributions of breeding parameters, and those specified with an observed or empirically derived φ<sub><i>R</i></sub> function generally outperformed those specified with simpler step functions. Strength of re-nesting compensation differed depending on the φ<sub><i>R</i></sub> function used. For Yellowhammers, type of φ<sub><i>R</i></sub> function in IB models marginally influenced population-level predictions of a simulated management intervention (potential population growth rate increased between 23% and 29% relative to no management intervention). In contrast, a simple deterministic productivity model, which did not simulate re-nesting compensation, predicted a 41% increase in potential population growth. At a population level, choice of φ<sub><i>R</i></sub> function may have less influence on IB model predictions, but choice of model itself (IB versus deterministic) may have substantial impact. We discuss how more biologically plausible φ<sub><i>R</i></sub> functions might either be observed directly, derived from nest data, or estimated from proxy information such as moult or brood patch changes.</p>\",\"PeriodicalId\":1,\"journal\":{\"name\":\"Accounts of Chemical Research\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":16.4000,\"publicationDate\":\"2023-08-23\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://onlinelibrary.wiley.com/doi/epdf/10.1111/ibi.13267\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Accounts of Chemical Research\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1111/ibi.13267\",\"RegionNum\":1,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"CHEMISTRY, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Accounts of Chemical Research","FirstCategoryId":"99","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1111/ibi.13267","RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0

摘要

在没有劳动密集型的铃响研究的情况下,测量多育物种的季节性生产力是困难的。基于个体的(IB)模型已被用于估算季节性生产力,但没有直接了解筑巢尝试的数量,但它们通常基于简化的重新筑巢概率(φR)步函数,而不是观察到的或更生物学上合理的步函数。我们提出了一个新的、开源的IB季节性生产力模型,以研究黑红start Phoenicurus ochruros和yellow whammer Emberiza citrinella为参数。我们研究了φR函数形状(经验与简化)如何影响(i)模型性能,(ii)抗拒补偿,以及(iii)模拟管理干预的人口水平预测。由于我们有更详细的人口统计数据,例如存活率,因此仅对yellow whammer进行了人口水平的预测。以模式为导向的模型显示,IB模型产生了真实的种群内育种参数分布,而那些由观察或经验推导的φR函数指定的模型通常优于那些由更简单的步进函数指定的模型。重嵌套补偿的强度取决于所使用的φR函数。对于黄锤,IB模型中的φR函数类型对模拟管理干预的种群水平预测影响很小(相对于没有管理干预,潜在种群增长率增加了23%至29%)。相比之下,一个简单的确定性生产力模型,没有模拟重巢补偿,预测潜在人口增长41%。在总体水平上,φR函数的选择可能对IB模型预测的影响较小,但模型本身的选择(IB vs确定性)可能有实质性的影响。我们讨论了如何从巢数据中直接观察到更具生物学合理性的φR函数,或者从换羽或育雏斑块变化等代理信息中估计φR函数。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

摘要图片

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Choice of model and re-nesting probability function influences behaviour of avian seasonal productivity models and their demographic predictions

Measuring seasonal productivity is difficult in multi-brooded species without labour-intensive ringing studies. Individual-based (IB) models have been used to estimate seasonal productivity with no direct knowledge of number of nesting attempts, but they are often based on simplified re-nesting probability (φR) step-functions instead of observed or more biologically plausible ones. We present a new, open-source IB seasonal productivity model parameterized from studies of Black Redstart Phoenicurus ochruros and Yellowhammer Emberiza citrinella. We examined how the φR function shape (empirical versus simplified) influenced (1) model performance, (2) re-nesting compensation and (3) population-level predictions of a simulated management intervention. Population-level predictions were made only for Yellowhammer as we had more detailed demographic data, such as survival rates, available. Pattern-oriented modelling revealed that IB models produced realistic within-population distributions of breeding parameters, and those specified with an observed or empirically derived φR function generally outperformed those specified with simpler step functions. Strength of re-nesting compensation differed depending on the φR function used. For Yellowhammers, type of φR function in IB models marginally influenced population-level predictions of a simulated management intervention (potential population growth rate increased between 23% and 29% relative to no management intervention). In contrast, a simple deterministic productivity model, which did not simulate re-nesting compensation, predicted a 41% increase in potential population growth. At a population level, choice of φR function may have less influence on IB model predictions, but choice of model itself (IB versus deterministic) may have substantial impact. We discuss how more biologically plausible φR functions might either be observed directly, derived from nest data, or estimated from proxy information such as moult or brood patch changes.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
期刊最新文献
Management of Cholesteatoma: Hearing Rehabilitation. Congenital Cholesteatoma. Evaluation of Cholesteatoma. Management of Cholesteatoma: Extension Beyond Middle Ear/Mastoid. Recidivism and Recurrence.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1