生命线队列研究中的遗传变异和肺功能下降

IF 2.7 4区 医学 Q2 GENETICS & HEREDITY Genes and Environment Pub Date : 2019-09-28 DOI:10.1183/13993003.congress-2019.pa5398
M. D. Vries, J. Vonk, M. Boezen
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引用次数: 0

摘要

全基因组关联研究(GWAS)已经确定了与气道阻塞和COPD存在相关的遗传变异。这些横断面研究并没有公正地对待不同途径可导致COPD发展的事实。一种途径是成年后肺功能加速衰退,这可能受到基因构成和吸烟的影响。在这项研究中,我们的目的是在基于生命线队列研究的普通人群中确定遗传变异和吸烟基因与肺功能下降的相互作用。方法:我们对8274名“生命线”研究对象进行了30岁后FEV1下降的GWAS。在4.5年的随访中确定了年度FEV1下降。在基线时对年龄、性别、身高和吸烟状况进行了调整。此外,进行了吸烟snp相互作用研究(GWIS),进行了类似的调整。结果:我们在15个基因座中发现73个变异与FEV1下降显著相关(p结论:我们在一个大型同质队列中发现了与FEV1下降相关的新遗传变异。对吸烟基因相互作用的研究发现了其他新的遗传变异。在之前的FEV1下降研究中,并没有发现所有的变异,这表明这种表型是非常异质的。
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Genetic variants and lung function decline in the LifeLines cohort study
Introduction: Genome wide association studies (GWAS) have identified genetic variants associated with the presence of airway obstruction and COPD. These cross-sectional studies did not do justice to the fact that different paths can lead to COPD development. One path is accelerated lung function decline in adulthood, which may be influenced by genetic make-up and smoking. In this study, we aimed to identify genetic variants and gene-by-smoking interactions with lung function decline in the general population based LifeLines cohort study. Methods: We performed a GWAS on FEV1 decline after age 30 in 8,274 Lifelines subjects. Annual FEV1 decline was defined over 4.5 years of follow up. The analysis was adjusted for age, gender, height and smoking status at baseline. Additionally, a SNP-by-smoking interaction study (GWIS) was performed, with similar adjustments. Results: We found 73 variants in 15 genetic loci significantly associated with FEV1 decline (p Conclusion: We identified novel genetic variants associated with FEV1 decline in a large homogeneous cohort. Investigation of the gene-by-smoking interaction resulted in the identification of other novel genetic variants. All variants have not been identified in previous studies on FEV1 decline, indicating that this phenotype is very heterogeneous.
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来源期刊
Genes and Environment
Genes and Environment Biochemistry, Genetics and Molecular Biology-Genetics
CiteScore
4.00
自引率
0.00%
发文量
24
审稿时长
27 weeks
期刊介绍: Genes and Environment is an open access, peer-reviewed journal that aims to accelerate communications among global scientists working in the field of genes and environment. The journal publishes articles across a broad range of topics including environmental mutagenesis and carcinogenesis, environmental genomics and epigenetics, molecular epidemiology, genetic toxicology and regulatory sciences. Topics published in the journal include, but are not limited to, mutagenesis and anti-mutagenesis in bacteria; genotoxicity in mammalian somatic cells; genotoxicity in germ cells; replication and repair; DNA damage; metabolic activation and inactivation; water and air pollution; ROS, NO and photoactivation; pharmaceuticals and anticancer agents; radiation; endocrine disrupters; indirect mutagenesis; threshold; new techniques for environmental mutagenesis studies; DNA methylation (enzymatic); structure activity relationship; chemoprevention of cancer; regulatory science. Genetic toxicology including risk evaluation for human health, validation studies on testing methods and subjects of guidelines for regulation of chemicals are also within its scope.
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