热带禾草穿山甲的结合力细菌多样性

IF 1.2 4区 农林科学 Q2 AGRICULTURE, MULTIDISCIPLINARY Bragantia Pub Date : 2022-01-01 DOI:10.1590/1678-4499.20220071
M. Alves, Cybelle Souza Oliveira, Gisely Moreira Vitalino, E. Carvalho, J. Oliveira, G. Fracetto, F. Fracetto, M. A. Lira Junior
{"title":"热带禾草穿山甲<s:1>的结合力细菌多样性","authors":"M. Alves, Cybelle Souza Oliveira, Gisely Moreira Vitalino, E. Carvalho, J. Oliveira, G. Fracetto, F. Fracetto, M. A. Lira Junior","doi":"10.1590/1678-4499.20220071","DOIUrl":null,"url":null,"abstract":": Some forage species, such as pangolão grass ( Digitaria eriantha Steud. cv. Survenola), are resilient in tropical semiarid regions. A possible reason for this is the presence of endophytic and rhizospheric microorganisms. Thus, this study evaluated the diversity of associative bacteria in pangolão grass. Bacteria associated with the roots, culm, leaves, and rhizospheric soil were isolated and characterized in three municipalities of Pernambuco, Brazil. An initial phenotypic characterization was followed by a genotypic assessment by based repetitive extragenic palindromic-polymerase chain reaction (BOX-PCR) and partial sequencing of the 16S rRNA gene. We obtained 325 phenotypically-characterized isolates grouped into 243 strains with 100% similarity by BOX-PCR. The most diverse sampling environment was Araripina, and all factors affected bacterial diversity. There were 135 groups with 90% similarity, that were represented by a single strain each for sequencing. Among the sequenced strains, 118 showed 96.84–99.9% similarity with previously described strains, whereas 17 could not be identified. The following 18 genera were identified from three phyla, five classes, seven orders, and 13 families: Achromobacter , Agrobacterium , Bacillus , Burkholderia , Curtobacterium , Enterobacter , Herbaspirillum , Kosakonia , Ochrobactrum , Paenibacillus , Pantoea , Priestia , Pseudomonas , Rhizobium , Serratia , Shinella , Stenotrophomonas , and Variovorax . The diversity of endophytic and rhizospheric bacteria may contribute to the resilience of pangolão , as various strains of these genera have been described as plant growth promoters. This is the first evaluation of pangolão bacterial diversity under tropical semiarid conditions. Since several of the genera include strains known to promote plant growth, we propose further research to evaluate this on crops.","PeriodicalId":9260,"journal":{"name":"Bragantia","volume":null,"pages":null},"PeriodicalIF":1.2000,"publicationDate":"2022-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"Associative bacterial diversity of pangolão, a stressresilient tropical grass\",\"authors\":\"M. Alves, Cybelle Souza Oliveira, Gisely Moreira Vitalino, E. Carvalho, J. Oliveira, G. Fracetto, F. Fracetto, M. A. Lira Junior\",\"doi\":\"10.1590/1678-4499.20220071\",\"DOIUrl\":null,\"url\":null,\"abstract\":\": Some forage species, such as pangolão grass ( Digitaria eriantha Steud. cv. Survenola), are resilient in tropical semiarid regions. A possible reason for this is the presence of endophytic and rhizospheric microorganisms. Thus, this study evaluated the diversity of associative bacteria in pangolão grass. Bacteria associated with the roots, culm, leaves, and rhizospheric soil were isolated and characterized in three municipalities of Pernambuco, Brazil. An initial phenotypic characterization was followed by a genotypic assessment by based repetitive extragenic palindromic-polymerase chain reaction (BOX-PCR) and partial sequencing of the 16S rRNA gene. We obtained 325 phenotypically-characterized isolates grouped into 243 strains with 100% similarity by BOX-PCR. The most diverse sampling environment was Araripina, and all factors affected bacterial diversity. There were 135 groups with 90% similarity, that were represented by a single strain each for sequencing. Among the sequenced strains, 118 showed 96.84–99.9% similarity with previously described strains, whereas 17 could not be identified. The following 18 genera were identified from three phyla, five classes, seven orders, and 13 families: Achromobacter , Agrobacterium , Bacillus , Burkholderia , Curtobacterium , Enterobacter , Herbaspirillum , Kosakonia , Ochrobactrum , Paenibacillus , Pantoea , Priestia , Pseudomonas , Rhizobium , Serratia , Shinella , Stenotrophomonas , and Variovorax . The diversity of endophytic and rhizospheric bacteria may contribute to the resilience of pangolão , as various strains of these genera have been described as plant growth promoters. This is the first evaluation of pangolão bacterial diversity under tropical semiarid conditions. Since several of the genera include strains known to promote plant growth, we propose further research to evaluate this on crops.\",\"PeriodicalId\":9260,\"journal\":{\"name\":\"Bragantia\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":1.2000,\"publicationDate\":\"2022-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Bragantia\",\"FirstCategoryId\":\"97\",\"ListUrlMain\":\"https://doi.org/10.1590/1678-4499.20220071\",\"RegionNum\":4,\"RegionCategory\":\"农林科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"AGRICULTURE, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Bragantia","FirstCategoryId":"97","ListUrlMain":"https://doi.org/10.1590/1678-4499.20220071","RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"AGRICULTURE, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 1

摘要

:一些饲料种类,如穿山甲 (Digitaria eriantha Steud)。简历。Survenola)在热带半干旱地区具有复原力。一个可能的原因是存在内生微生物和根际微生物。因此,本研究对穿山甲草伴生菌的多样性进行了评价。与根、茎、叶和根际土壤相关的细菌在巴西伯南布哥的三个城市被分离和表征。通过重复基因外回文聚合酶链式反应(BOX-PCR)和16S rRNA基因的部分测序进行初步表型鉴定和基因型评估。我们通过BOX-PCR获得325株表型特征的分离株,分为243株,相似性为100%。采样环境以Araripina为最,各因素均影响细菌多样性。有135个相似度为90%的群体,每个群体用一个菌株来表示。测序菌株中,118株与已有菌株相似度为96.84 ~ 99.9%,17株无法鉴定。从3门5纲7目13科共鉴定出无色杆菌属、农杆菌属、芽孢杆菌属、伯氏杆菌属、Curtobacterium属、Enterobacter属、Herbaspirillum属、Kosakonia属、Ochrobactrum属、Paenibacillus属、Pantoea属、Priestia属、Pseudomonas属、Rhizobium属、Serratia属、Shinella属、窄养单胞菌属、Variovorax属。内生细菌和根际细菌的多样性可能有助于穿山甲的恢复力,因为这些属的各种菌株已被描述为植物生长促进剂。这是对热带半干旱条件下穿山甲细菌多样性的首次评估。由于一些属包括已知促进植物生长的菌株,我们建议进一步研究以评估作物的这种作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Associative bacterial diversity of pangolão, a stressresilient tropical grass
: Some forage species, such as pangolão grass ( Digitaria eriantha Steud. cv. Survenola), are resilient in tropical semiarid regions. A possible reason for this is the presence of endophytic and rhizospheric microorganisms. Thus, this study evaluated the diversity of associative bacteria in pangolão grass. Bacteria associated with the roots, culm, leaves, and rhizospheric soil were isolated and characterized in three municipalities of Pernambuco, Brazil. An initial phenotypic characterization was followed by a genotypic assessment by based repetitive extragenic palindromic-polymerase chain reaction (BOX-PCR) and partial sequencing of the 16S rRNA gene. We obtained 325 phenotypically-characterized isolates grouped into 243 strains with 100% similarity by BOX-PCR. The most diverse sampling environment was Araripina, and all factors affected bacterial diversity. There were 135 groups with 90% similarity, that were represented by a single strain each for sequencing. Among the sequenced strains, 118 showed 96.84–99.9% similarity with previously described strains, whereas 17 could not be identified. The following 18 genera were identified from three phyla, five classes, seven orders, and 13 families: Achromobacter , Agrobacterium , Bacillus , Burkholderia , Curtobacterium , Enterobacter , Herbaspirillum , Kosakonia , Ochrobactrum , Paenibacillus , Pantoea , Priestia , Pseudomonas , Rhizobium , Serratia , Shinella , Stenotrophomonas , and Variovorax . The diversity of endophytic and rhizospheric bacteria may contribute to the resilience of pangolão , as various strains of these genera have been described as plant growth promoters. This is the first evaluation of pangolão bacterial diversity under tropical semiarid conditions. Since several of the genera include strains known to promote plant growth, we propose further research to evaluate this on crops.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Bragantia
Bragantia AGRICULTURE, MULTIDISCIPLINARY-
CiteScore
2.40
自引率
8.30%
发文量
33
审稿时长
4 weeks
期刊介绍: Bragantia é uma revista de ciências agronômicas editada pelo Instituto Agronômico da Agência Paulista de Tecnologia dos Agronegócios, da Secretaria de Agricultura e Abastecimento do Estado de São Paulo, com o objetivo de publicar trabalhos científicos originais que contribuam para o desenvolvimento das ciências agronômicas. A revista é publicada desde 1941, tornando-se semestral em 1984, quadrimestral em 2001 e trimestral em 2005. É filiada à Associação Brasileira de Editores Científicos (ABEC).
期刊最新文献
Corn straw return effectively improves the stability and increases the carbon and nitrogen contents of waterstable aggregates in northeastern China black soil Spermine decreases ethylene and increases sugars and phenolic compounds in nasturtium flowers grown under drought and salt stress Genetic divergence for seed traits in Passiflora full-sib families under recurrent selection for resistance to the cowpea aphid-borne mosaic virus Physiological and agronomic response of soybean cultivars to soil compaction in the Brazilian Cerrado Training systems improved agronomic characteristics and quality of ‘Niagara Rosada’ table grapes
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1