{"title":"欧亚大陆麻线虫的单倍型多样性","authors":"M. Clausi, D. Leone, S. Spiridonov","doi":"10.19263/redia-103.20.21","DOIUrl":null,"url":null,"abstract":"Phylogenetic analysis of ITS rDNA sequences of the entomopathogenic nematode Steinernema feltiae Filipjev, 1934 (Wouts, Mráček, Gerdin and Bedding, 1982) was used to infer intraspecific genetic variability of this rhabditid nematode. Nucleotide intraspecific differences among S. feltiae isolates reached the level of 19 base pairs per ITS rDNA region, i.e. up to 2.9%. Several weakly or moderately supported intraspecific clades were detected. Sicilian and Swiss isolates of S. feltiae were found clustering together. Swiss strain ‘St. Bernard’ has been isolated on the St. Bernardino mountain pass in Switzerland in 2000. Phylogenetic relationships among S. feltiae isolates were inferred by using three different methods (maximum parsimony, neighbor joining and maximum likelihood). The topologies of the phylogenetic trees were identical and thus only ML tree is presented. ML tree revealed that S. feltiae isolates from Israel and Armenia grouped at the basal position of the tree, while in the spanning network obtained with POPART software, Iranian and Ukrainian isolates were the closest to the outgroup. In all methods of analyses, the European and Siberian strains of S. feltiae occupied terminal positions. Thus, further studies on the intraspecific genetic variability of entomopathogenic nematodes is needed.","PeriodicalId":21092,"journal":{"name":"Redia-Giornale Di Zoologia","volume":"1 2","pages":"133-136"},"PeriodicalIF":0.8000,"publicationDate":"2020-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"HAPLOTYPE DIVERSITY OF STEINERNEMA FELTIAE (NEMATODA: STEINERNEMATIDAE) IN EURASIA\",\"authors\":\"M. Clausi, D. Leone, S. Spiridonov\",\"doi\":\"10.19263/redia-103.20.21\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Phylogenetic analysis of ITS rDNA sequences of the entomopathogenic nematode Steinernema feltiae Filipjev, 1934 (Wouts, Mráček, Gerdin and Bedding, 1982) was used to infer intraspecific genetic variability of this rhabditid nematode. Nucleotide intraspecific differences among S. feltiae isolates reached the level of 19 base pairs per ITS rDNA region, i.e. up to 2.9%. Several weakly or moderately supported intraspecific clades were detected. Sicilian and Swiss isolates of S. feltiae were found clustering together. Swiss strain ‘St. Bernard’ has been isolated on the St. Bernardino mountain pass in Switzerland in 2000. Phylogenetic relationships among S. feltiae isolates were inferred by using three different methods (maximum parsimony, neighbor joining and maximum likelihood). The topologies of the phylogenetic trees were identical and thus only ML tree is presented. ML tree revealed that S. feltiae isolates from Israel and Armenia grouped at the basal position of the tree, while in the spanning network obtained with POPART software, Iranian and Ukrainian isolates were the closest to the outgroup. In all methods of analyses, the European and Siberian strains of S. feltiae occupied terminal positions. Thus, further studies on the intraspecific genetic variability of entomopathogenic nematodes is needed.\",\"PeriodicalId\":21092,\"journal\":{\"name\":\"Redia-Giornale Di Zoologia\",\"volume\":\"1 2\",\"pages\":\"133-136\"},\"PeriodicalIF\":0.8000,\"publicationDate\":\"2020-12-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Redia-Giornale Di Zoologia\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.19263/redia-103.20.21\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"ZOOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Redia-Giornale Di Zoologia","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.19263/redia-103.20.21","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"ZOOLOGY","Score":null,"Total":0}
HAPLOTYPE DIVERSITY OF STEINERNEMA FELTIAE (NEMATODA: STEINERNEMATIDAE) IN EURASIA
Phylogenetic analysis of ITS rDNA sequences of the entomopathogenic nematode Steinernema feltiae Filipjev, 1934 (Wouts, Mráček, Gerdin and Bedding, 1982) was used to infer intraspecific genetic variability of this rhabditid nematode. Nucleotide intraspecific differences among S. feltiae isolates reached the level of 19 base pairs per ITS rDNA region, i.e. up to 2.9%. Several weakly or moderately supported intraspecific clades were detected. Sicilian and Swiss isolates of S. feltiae were found clustering together. Swiss strain ‘St. Bernard’ has been isolated on the St. Bernardino mountain pass in Switzerland in 2000. Phylogenetic relationships among S. feltiae isolates were inferred by using three different methods (maximum parsimony, neighbor joining and maximum likelihood). The topologies of the phylogenetic trees were identical and thus only ML tree is presented. ML tree revealed that S. feltiae isolates from Israel and Armenia grouped at the basal position of the tree, while in the spanning network obtained with POPART software, Iranian and Ukrainian isolates were the closest to the outgroup. In all methods of analyses, the European and Siberian strains of S. feltiae occupied terminal positions. Thus, further studies on the intraspecific genetic variability of entomopathogenic nematodes is needed.
期刊介绍:
Redia supports its long history of basic and applied research in entomology and invertebrate zoology in the field of crop and forest tree protection responding at the same time to the increasing need of innovation and technological improvement.