基于深度卷积神经网络直径距离特征的HEp-2显微图像细胞水平自动分类

Mitchell Jensen, Khamael Al-Dulaimi, Khairiyah Saeed Abduljabbar, Jasmine Banks
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摘要

摘要:为了识别人类自身免疫性疾病,在细胞水平上分析HEp-2染色模式是临床实践研究界的金标准。由于细胞密度、大小、形状和模式的变化、特征的过拟合、大规模数据量、细胞染色和图像质量差,自动化过程是一项复杂的任务。目前存在几种分析和分类HEp-2细胞显微镜图像的机器学习方法。然而,由于这些挑战,准确性仍未达到医疗应用和计算机辅助诊断所需的水平。本研究旨在实现HEp-2染色细胞显微图像的自动分类,提高计算机辅助诊断的准确性。本文提出了基于边缘检测技术的水平集方法对HEp-2细胞形状进行分割的深度卷积神经网络(Deep Convolutional Neural Networks, DCNNs)技术,在细胞水平上将HEp-2细胞模式分为6类。DCNNs被设计用于识别与HEp-2细胞类型相关的细胞形状和基本距离特征。本文研究了我们提出的方法在基准数据集上的有效性。结果表明,该方法在基准数据集和最先进的方法中具有很高的优越性。结果表明,该方法对细胞密度、大小、形状和模式、过拟合特征、大规模数据量以及不同实验室环境下染色细胞的变化具有良好的适应性。在细胞水平上对HEp-2染色模式的准确分类有助于提高未来诊断过程中计算机辅助诊断的准确性。
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Automated Classification of Cell Level of HEp-2 Microscopic Images Using Deep Convolutional Neural Networks-Based Diameter Distance Features
Abstract: To identify autoimmune diseases in humans, analysis of HEp-2 staining patterns at cell level is the gold standard for clinical practice research communities. An automated procedure is a complicated task due to variations in cell densities, sizes, shapes and patterns, overfitting of features, large-scale data volume, stained cells and poor quality of images. Several machine learning methods that analyse and classify HEp-2 cell microscope images currently exist. However, accuracy is still not at the level required for medical applications and computer aided diagnosis due to those challenges. The purpose of this work to automate classification procedure of HEp-2 stained cells from microscopic images and improve the accuracy of computer aided diagnosis. This work proposes Deep Convolutional Neural Networks (DCNNs) technique to classify HEp-2 cell patterns at cell level into six classes based on employing the level-set method via edge detection technique to segment HEp-2 cell shape. The DCNNs are designed to identify cell-shape and fundamental distance features related with HEp-2 cell types. This paper is investigated the effectiveness of our proposed method over benchmarked dataset. The result shows that the proposed method is highly superior comparing with other methods in benchmarked dataset and state-of-the-art methods. The result demonstrates that the proposed method has an excellent adaptability across variations in cell densities, sizes, shapes and patterns, overfitting features, large-scale data volume, and stained cells under different lab environments. The accurate classification of HEp-2 staining pattern at cell level helps increasing the accuracy of computer aided diagnosis for diagnosis process in the future.
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