用定量构效关系分析研究吖啶类衍生物对寄生虫原鞭毛体和无尾鞭毛体的抗利什曼活性

Samir CHTITA, M. Ghamali, R. Hmamouchi, B. Elidrissi, M. Bourass, M. Larif, M. Bouachrine, T. Lakhlifi
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引用次数: 23

摘要

为了寻找新的有效抗利什曼原虫(抗promastigotes和amastigotes形式的寄生虫)药物,采用多元线性回归和人工神经网络(ANN)方法,对一系列60个不同取代的吖啶类衍生物进行定量构效关系(QSAR)分析,研究、解释和预测活性,并设计新化合物。使用高斯03、ACD/ChemSketch、Marvin Sketch和ChemOffice程序计算所使用的描述符。根据经济合作与发展组织(OECD)制定的原则,对所开发的QSAR模型进行了验证。主成分分析(PCA)已被用于选择与活动高度相关的描述符。采用单变量划分(UP)方法将数据集划分为训练集和测试集。多元线性回归(MLR)法测定的抗利什曼原虫活性的相关系数分别为0.850和0.814。采用内部和外部验证来确定两种MLR模型的QSAR统计质量。人工神经网络(ANN)方法在考虑MLR相关描述符的情况下,与7-3-1和6-3-1人工神经网络模型的抗利什曼原虫活性的相关系数分别为0.933和0.918。采用简单而有效的方法对MLR模型的适用范围进行了研究,以检测异常值和外部化合物。描述了不同描述符对活性的影响,并用于研究和设计比现有活性更高的新化合物。
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Investigation of Antileishmanial Activities of Acridines Derivatives against Promastigotes and Amastigotes Form of Parasites Using Quantitative Structure Activity Relationship Analysis
In a search of newer and potent antileishmanial (against promastigotes and amastigotes form of parasites) drug, a series of 60 variously substituted acridines derivatives were subjected to a quantitative structure activity relationship (QSAR) analysis for studying, interpreting, and predicting activities and designing new compounds by using multiple linear regression and artificial neural network (ANN) methods. The used descriptors were computed with Gaussian 03, ACD/ChemSketch, Marvin Sketch, and ChemOffice programs. The QSAR models developed were validated according to the principles set up by the Organisation for Economic Co-operation and Development (OECD). The principal component analysis (PCA) has been used to select descriptors that show a high correlation with activities. The univariate partitioning (UP) method was used to divide the dataset into training and test sets. The multiple linear regression (MLR) method showed a correlation coefficient of 0.850 and 0.814 for antileishmanial activities against promastigotes and amastigotes forms of parasites, respectively. Internal and external validations were used to determine the statistical quality of QSAR of the two MLR models. The artificial neural network (ANN) method, considering the relevant descriptors obtained from the MLR, showed a correlation coefficient of 0.933 and 0.918 with 7-3-1 and 6-3-1 ANN models architecture for antileishmanial activities against promastigotes and amastigotes forms of parasites, respectively. The applicability domain of MLR models was investigated using simple and leverage approaches to detect outliers and outsides compounds. The effects of different descriptors in the activities were described and used to study and design new compounds with higher activities compared to the existing ones.
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