Mohammad Yahya Vahidi Mehrjardi, Seyed Mohsen Aghaei Zarch, M. Dehghani
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All laboratory procedures used in this experimental study were carried out in genetic laboratory of Shahid Sadoughi University of Medical Sciences. \nResults: Sequence analysis of HOXB1 gene by ABI Prism 3130 Genetic Analyzer (Applied Biosystems, Foster City, CA, USA) revealed a family with 5 homozygous (22±17 years) and 22 healthy heterozygous carriers (42±19 years) for 7bp deletion in HOXB1 gene along with 9 healthy wild type (55±41 years). Gene expression analysis by RT-qPCR demonstrated that expression level of HOXB1 gene in wild type and heterozygous carriers specimens had similar levels (p=0.05). \nConclusion: Although HOXB1 mutations has been reported in AML, but association between HOXB1 mutation and AML was not found in our study. Additionally, HOXB1 expression levels showed no significant difference between wild type and heterozygous carriers. So, HOXB1 gene expression cannot provide a powerful tool to differentiate wild type from heterozygous carries.","PeriodicalId":44212,"journal":{"name":"Iranian Journal of Pediatric Hematology and Oncology","volume":"559 1","pages":""},"PeriodicalIF":0.4000,"publicationDate":"2019-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"The Relationship between Mutation in HOXB1 Gene and Acute Myeloid Leukemia\",\"authors\":\"Mohammad Yahya Vahidi Mehrjardi, Seyed Mohsen Aghaei Zarch, M. Dehghani\",\"doi\":\"10.18502/ijpho.v9i4.1571\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Background: HOX genes are an exceedingly preserved family of homeodomain-involving transcription factors. They are related to a number of malignancies, comprising acute myeloid leukemia (AML). This study aimed to evaluate the effect of HOXB1 7bp deletion mutation on HOXB1gene expression in 36 individuals. \\nMaterials and Methods: The present cross-sectional study was done on a large Iranian family. In this experimental study, 5 homozygous 7bp deletion individuals along with their unaffected siblings and their parents were investigated. The candidate gene, HOXB1 was screened and analyzed in blood samples of these participants. After RNA extraction, cDNA was synthesized according to manufacturer’s protocol. HOXB1 expression level was analyzed by 2ΔΔCT method. All laboratory procedures used in this experimental study were carried out in genetic laboratory of Shahid Sadoughi University of Medical Sciences. \\nResults: Sequence analysis of HOXB1 gene by ABI Prism 3130 Genetic Analyzer (Applied Biosystems, Foster City, CA, USA) revealed a family with 5 homozygous (22±17 years) and 22 healthy heterozygous carriers (42±19 years) for 7bp deletion in HOXB1 gene along with 9 healthy wild type (55±41 years). Gene expression analysis by RT-qPCR demonstrated that expression level of HOXB1 gene in wild type and heterozygous carriers specimens had similar levels (p=0.05). \\nConclusion: Although HOXB1 mutations has been reported in AML, but association between HOXB1 mutation and AML was not found in our study. Additionally, HOXB1 expression levels showed no significant difference between wild type and heterozygous carriers. 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引用次数: 0
摘要
背景:HOX基因是一个保存非常完好的同源结构域相关转录因子家族。它们与许多恶性肿瘤有关,包括急性髓性白血病(AML)。本研究旨在评价HOXB1 7bp缺失突变对36例个体HOXB1基因表达的影响。材料和方法:本横断面研究是在一个伊朗大家庭中进行的。本实验研究了5个纯合子7bp缺失个体及其未受影响的兄弟姐妹和父母。候选基因HOXB1在这些参与者的血液样本中被筛选和分析。提取RNA后,按照厂商方案合成cDNA。2ΔΔCT法分析HOXB1表达水平。本实验研究中使用的所有实验室程序均在Shahid Sadoughi医科大学遗传实验室进行。结果:使用ABI Prism 3130基因分析仪(Applied Biosystems, Foster City, CA, USA)对HOXB1基因进行序列分析,发现该家族有5个纯合子(22±17岁)和22个健康杂合子(42±19岁),HOXB1基因缺失7bp, 9个健康野生型(55±41岁)。RT-qPCR基因表达分析显示,野生型和杂合携带者标本中HOXB1基因表达水平相近(p=0.05)。结论:虽然在AML中有HOXB1突变的报道,但在我们的研究中没有发现HOXB1突变与AML的相关性。此外,HOXB1表达水平在野生型和杂合型携带者之间无显著差异。因此,HOXB1基因表达不能作为区分野生型和杂合型的有力工具。
The Relationship between Mutation in HOXB1 Gene and Acute Myeloid Leukemia
Background: HOX genes are an exceedingly preserved family of homeodomain-involving transcription factors. They are related to a number of malignancies, comprising acute myeloid leukemia (AML). This study aimed to evaluate the effect of HOXB1 7bp deletion mutation on HOXB1gene expression in 36 individuals.
Materials and Methods: The present cross-sectional study was done on a large Iranian family. In this experimental study, 5 homozygous 7bp deletion individuals along with their unaffected siblings and their parents were investigated. The candidate gene, HOXB1 was screened and analyzed in blood samples of these participants. After RNA extraction, cDNA was synthesized according to manufacturer’s protocol. HOXB1 expression level was analyzed by 2ΔΔCT method. All laboratory procedures used in this experimental study were carried out in genetic laboratory of Shahid Sadoughi University of Medical Sciences.
Results: Sequence analysis of HOXB1 gene by ABI Prism 3130 Genetic Analyzer (Applied Biosystems, Foster City, CA, USA) revealed a family with 5 homozygous (22±17 years) and 22 healthy heterozygous carriers (42±19 years) for 7bp deletion in HOXB1 gene along with 9 healthy wild type (55±41 years). Gene expression analysis by RT-qPCR demonstrated that expression level of HOXB1 gene in wild type and heterozygous carriers specimens had similar levels (p=0.05).
Conclusion: Although HOXB1 mutations has been reported in AML, but association between HOXB1 mutation and AML was not found in our study. Additionally, HOXB1 expression levels showed no significant difference between wild type and heterozygous carriers. So, HOXB1 gene expression cannot provide a powerful tool to differentiate wild type from heterozygous carries.