应用改进的快速Taq Man-MGB实时RT-PCR法诊断传染性法氏囊病临床病例

Maryame Cheggag, K. Zro, G. Sebbar, Naoufal Rahmatallah, M. Mouahid, M. E. Houadfi, F. Kichou
{"title":"应用改进的快速Taq Man-MGB实时RT-PCR法诊断传染性法氏囊病临床病例","authors":"Maryame Cheggag, K. Zro, G. Sebbar, Naoufal Rahmatallah, M. Mouahid, M. E. Houadfi, F. Kichou","doi":"10.17265/2161-6256/2018.04.006","DOIUrl":null,"url":null,"abstract":"Infectious bursal disease (IBD) is an important contagious viral infection of immune system of poultry. This infection possesses a permanent threat to the profitability of poultry industry worldwide. The aim of this work was to modify the Taq Man-MGB real-time reverse transcription-polymerase chain reaction (rRT-PCR) in one step involving two fluorogenic Taq Man labeled probe and using this protocol for detection of infectious bursal disease virus (IBDV) collected from suspected cases distributed in different regions of the country during the period 2013-2016. The intralaboratory validation of modified method was realized for specificity, linearity, repeatability, sensitivity and reproducibility. It allowed reducing the test running time by six folds. This method was applied on 102 pools of bursa of fabricius (BF) samples collected from affected broiler farms suspected to be infected by IBDV. Birds showing macroscopic lesions including muscle petechial hemorrhages, hypertrophy and hemorrhage of BF, were subjected to molecular analysis using modified protocol “Taq Man-MGB rRT-PCR”. The validation satisfied all criteria and the assay developed could be a useful tool for a very rapid diagnosis of IBDV and permit to detect and to discriminate in one-step very virulent (vv) from non-vv (classic and variant) IBDV strains. Out of 84 IBDV positive samples, a prevalence of 39% for vv strains and 61% for classical strains was noted. These results indicate that despite the vaccination against IBDV, the vv form of this pathologie continues to cause serious problems for Moroccan broiler chickens. The obtained results indicate the successfully detection of IBDV and differentiated all vvIBDV strains from non-vvIBDV strains; Avian infectious agent RNA viruses tested are negative, demonstrating great specificity of the assay. The results obtained indicate that this method is suitable as a routine laboratory test for the rapid detection and differentiation of IBDV strains in samples of avian origin.","PeriodicalId":14977,"journal":{"name":"Journal of agricultural science & technology A","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2018-04-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"2","resultStr":"{\"title\":\"Diagnosis of Clinical Cases of Infectious Bursal Disease Using a Modified Rapid Taq Man-MGB Real-Time RT-PCR Assay\",\"authors\":\"Maryame Cheggag, K. Zro, G. Sebbar, Naoufal Rahmatallah, M. Mouahid, M. E. Houadfi, F. Kichou\",\"doi\":\"10.17265/2161-6256/2018.04.006\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Infectious bursal disease (IBD) is an important contagious viral infection of immune system of poultry. This infection possesses a permanent threat to the profitability of poultry industry worldwide. The aim of this work was to modify the Taq Man-MGB real-time reverse transcription-polymerase chain reaction (rRT-PCR) in one step involving two fluorogenic Taq Man labeled probe and using this protocol for detection of infectious bursal disease virus (IBDV) collected from suspected cases distributed in different regions of the country during the period 2013-2016. The intralaboratory validation of modified method was realized for specificity, linearity, repeatability, sensitivity and reproducibility. It allowed reducing the test running time by six folds. This method was applied on 102 pools of bursa of fabricius (BF) samples collected from affected broiler farms suspected to be infected by IBDV. Birds showing macroscopic lesions including muscle petechial hemorrhages, hypertrophy and hemorrhage of BF, were subjected to molecular analysis using modified protocol “Taq Man-MGB rRT-PCR”. The validation satisfied all criteria and the assay developed could be a useful tool for a very rapid diagnosis of IBDV and permit to detect and to discriminate in one-step very virulent (vv) from non-vv (classic and variant) IBDV strains. Out of 84 IBDV positive samples, a prevalence of 39% for vv strains and 61% for classical strains was noted. These results indicate that despite the vaccination against IBDV, the vv form of this pathologie continues to cause serious problems for Moroccan broiler chickens. The obtained results indicate the successfully detection of IBDV and differentiated all vvIBDV strains from non-vvIBDV strains; Avian infectious agent RNA viruses tested are negative, demonstrating great specificity of the assay. The results obtained indicate that this method is suitable as a routine laboratory test for the rapid detection and differentiation of IBDV strains in samples of avian origin.\",\"PeriodicalId\":14977,\"journal\":{\"name\":\"Journal of agricultural science & technology A\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2018-04-28\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"2\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of agricultural science & technology A\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.17265/2161-6256/2018.04.006\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of agricultural science & technology A","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.17265/2161-6256/2018.04.006","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 2

摘要

传染性法氏囊病(IBD)是禽类免疫系统中一种重要的传染性病毒感染。这种感染对全世界家禽业的盈利能力构成永久性威胁。本研究的目的是对Taq Man- mgb实时逆转录聚合酶链反应(rRT-PCR)进行一步修饰,包括两个荧光Taq Man标记探针,并利用该方案检测2013-2016年分布在全国不同地区的疑似病例采集的传染性法氏囊病病毒(IBDV)。对改进后的方法进行了特异性、线性度、重复性、灵敏度和重现性的实验室验证。它允许将测试运行时间减少六倍。采用该方法对从疑似感染IBDV的肉鸡养殖场采集的102份法氏囊(BF)标本进行了分析。对出现肌肉点状出血、肥大和BF出血等宏观病变的鸟类,采用改进的“Taq Man-MGB rRT-PCR”方案进行分子分析。验证符合所有标准,该检测方法可成为快速诊断IBDV的有用工具,并可一步检测和区分非常毒力(vv)和非vv(经典和变异)IBDV菌株。在84份IBDV阳性样本中,vv株和经典株的患病率分别为39%和61%。这些结果表明,尽管接种了针对IBDV的疫苗,但这种病理的vv形式继续对摩洛哥肉鸡造成严重问题。结果表明,成功地检测出了IBDV,并将所有vvIBDV株与非vvIBDV株进行了区分;禽感染原RNA病毒检测结果为阴性,表明该试验具有很强的特异性。结果表明,该方法可作为一种常规的实验室检测方法,用于禽源性IBDV毒株的快速检测和鉴别。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Diagnosis of Clinical Cases of Infectious Bursal Disease Using a Modified Rapid Taq Man-MGB Real-Time RT-PCR Assay
Infectious bursal disease (IBD) is an important contagious viral infection of immune system of poultry. This infection possesses a permanent threat to the profitability of poultry industry worldwide. The aim of this work was to modify the Taq Man-MGB real-time reverse transcription-polymerase chain reaction (rRT-PCR) in one step involving two fluorogenic Taq Man labeled probe and using this protocol for detection of infectious bursal disease virus (IBDV) collected from suspected cases distributed in different regions of the country during the period 2013-2016. The intralaboratory validation of modified method was realized for specificity, linearity, repeatability, sensitivity and reproducibility. It allowed reducing the test running time by six folds. This method was applied on 102 pools of bursa of fabricius (BF) samples collected from affected broiler farms suspected to be infected by IBDV. Birds showing macroscopic lesions including muscle petechial hemorrhages, hypertrophy and hemorrhage of BF, were subjected to molecular analysis using modified protocol “Taq Man-MGB rRT-PCR”. The validation satisfied all criteria and the assay developed could be a useful tool for a very rapid diagnosis of IBDV and permit to detect and to discriminate in one-step very virulent (vv) from non-vv (classic and variant) IBDV strains. Out of 84 IBDV positive samples, a prevalence of 39% for vv strains and 61% for classical strains was noted. These results indicate that despite the vaccination against IBDV, the vv form of this pathologie continues to cause serious problems for Moroccan broiler chickens. The obtained results indicate the successfully detection of IBDV and differentiated all vvIBDV strains from non-vvIBDV strains; Avian infectious agent RNA viruses tested are negative, demonstrating great specificity of the assay. The results obtained indicate that this method is suitable as a routine laboratory test for the rapid detection and differentiation of IBDV strains in samples of avian origin.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
期刊最新文献
Case Study: Promoting Sustainable Energy Greenhouse Heating Systems to Small-Scale Local Farms The Discovery of a Green Wood Beetle Diastocera trifasciata (Coleoptera: Lamiinae) on Mango Tree in South Sudan Integrated Water Resources Management in the Sandougou Catchment Area (Senegal): Going beyond Soil Defence and Restoration (SDR) Application of Symmetric Ploughs for Tillage on Wetland Paddy Fields Evaluation of a Fermented Millet Product of Bacillus subtilis ATCC 55033 as Potential in Biocontrol of Bacteriosis (Xanthomonas axonopodis) in Gulupa (Passiflora edulis Sims)
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1