Helvella 属的系统发育和物种多样性,重点是来自中国的 18 个新物种。

IF 1.8 Q3 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Algorithms Pub Date : 2023-11-01 Epub Date: 2023-08-29 DOI:10.3114/fuse.2023.12.08
N Mao, Y Y Xu, Y X Zhang, H Zhou, X B Huang, C L Hou, L Fan
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引用次数: 0

摘要

赫尔维拉(Helvella)是一种广泛存在于森林中、经常出现的真菌类群,但对中国赫尔维拉的物种多样性和分子系统发育仍不完全了解。在这项工作中,我们利用多焦点序列数据进行了全面的系统发育分析。本研究采用了六个数据集,包括一个五分点序列数据集(ITS、nrLSU、tef1-α、rpb2、hsp)、一个双分点序列数据集(ITS、nrLSU)和四个单分点序列数据集(ITS)。共使用了 I 946 个序列,其中 713 个是新产生的,包括 170 个 ITS 序列、174 个 nrLSU 序列、131 个 tef1-α 序列、107 个 rpb2 序列和 131 个 hsp 序列。基于五焦点数据集的系统发育显示,Helvellas. str.是单系的,并清晰地识别出四个系统发育支系,即 Acetabulum 支系、Crispa 支系、Elastica 支系和 Lacunosa 支系。共确认了 24 个支系或亚支系,其中 2 个是新的支系或亚支系,其余 13 个支系或亚支系与以前的研究一致。中国的 Helvella 物种分布在 4 个支系的 22 个系中。基于双焦点数据集和四个单焦点数据集的系统发育分析证实,中国至少存在 93 个系统发育物种。其中,58 个被鉴定为已知种,包括 1 个新指定的讲座型和表型种,18 个为本文新描述的种,其余 17 个分类群被认为是科学上的新种,但由于缺乏或没有顶生材料而仍未命名。此外,本文还讨论了以前在中国记录的 Helvella 物种。本报告提供了 76 个已确认物种的清单,其中包括新提出的物种。虽然 H. crispa 和 H. elastica 在中国都有常见记录,但它们的出现未得到证实。引用:Mao N, Xu YY, Zhang YX, Zhou H, Huang XB, Hou CL, Fan L (2023).Helvella 属的系统发育和物种多样性,重点是来自中国的 18 个新种。Fungal Systematics and Evolution 12: 111-152. doi: 10.3114/fuse.2023.12.08.
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Phylogeny and species diversity of the genus Helvella with emphasis on eighteen new species from China.

Helvella is a widespread, frequently encountered fungal group appearing in forests, but the species diversity and molecular phylogeny of Helvella in China remains incompletely understood. In this work, we performed comprehensive phylogenetic analyses using multilocus sequence data. Six datasets were employed, including a five-locus concatenated dataset (ITS, nrLSU, tef1-α, rpb2, hsp), a two-locus concatenated dataset (ITS, nrLSU), and four single-locus datasets (ITS) that were divided based on the four different phylogenetic clades of Helvella recognized in this study. A total of I 946 sequences were used, of which 713 were newly generated, including 170 sequences of ITS, 174 sequences of nrLSU, 131 sequences of tef1-α, 107 sequences of rpb2 and 131 sequences of hsp. The phylogeny based on the five-locus concatenated dataset revealed that Helvellas. str. is monophyletic and four phylogenetic clades are clearly recognized, i.e., Acetabulum clade, Crispa clade, Elastica clade, and Lacunosa clade. A total of 24 lineages or subclades were recognized, II of which were new, the remaining 13 corresponding with previous studies. Chinese Helvella species are distributed in 22 lineages across four clades. Phylogenetic analyses based on the two-locus concatenated dataset and four single-locus datasets confirmed the presence of at least 93 phylogenetic species in China. Among them, 58 are identified as known species, including a species with a newly designated lectotype and epitype, 18 are newly described in this paper, and the remaining 17 taxa are putatively new to science but remain unnamed due to the paucity or absence of ascomatal materials. In addition, the Helvella species previously recorded in China are discussed. A list of 76 confirmed species, including newly proposed species, is provided. The occurrence of H. crispa and H. elastica are not confirmed although both are commonly recorded in China. Citation: Mao N, Xu YY, Zhang YX, Zhou H, Huang XB, Hou CL, Fan L (2023). Phylogeny and species diversity of the genus Helvella with emphasis on eighteen new species from China. Fungal Systematics and Evolution 12: 111-152. doi: 10.3114/fuse.2023.12.08.

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来源期刊
Algorithms
Algorithms Mathematics-Numerical Analysis
CiteScore
4.10
自引率
4.30%
发文量
394
审稿时长
11 weeks
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