苯,阴离子-π识别中意想不到的结合单元:CH/π相互作用的关键作用

Decis. Sci. Pub Date : 2022-08-22 DOI:10.3390/sci4030032
D. Quiñonero, A. Frontera
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引用次数: 1

摘要

我们报告了高水平从头计算(CCSD(T)(full)/CBS//SCS-RI-MP2(full)/ augg -cc- pwcvtz),证明了以苯为π系同时建立阴离子-π和CH/π相互作用时协同效应的重要性。事实上,大多数配合物都表现出很高的协同能,占总相互作用能的17% ~ 25.3%,这表明CH/π对阴离子-π相互作用有很强的影响,反之亦然。此外,采用对称自适应微扰理论(SAPT)划分方案研究了不同能量对相互作用能量的贡献,并探讨了两种相互作用之间相互作用的物理性质。此外,利用分子中原子(AIM)理论和非共价相互作用(NCI)方法进一步分析了这两种相互作用。最后,给出了一些来自蛋白质数据库(PDB)的例子。所有结果都强调,由于生物分子中普遍存在CH键、苯环和阴离子,这两种相互作用的同时形成可能在生物系统中发挥重要作用。
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Benzene, an Unexpected Binding Unit in Anion–π Recognition: The Critical Role of CH/π Interactions
We report high-level ab initio calculations (CCSD(T)(full)/CBS//SCS-RI-MP2(full)/aug-cc-pwCVTZ) that demonstrate the importance of cooperativity effects when Anion–π and CH/π interactions are simultaneously established with benzene as the π-system. In fact, most of the complexes exhibit high cooperativity energies that range from 17% to 25.3% of the total interaction energy, which is indicative of the strong influence of the CH/π on the Anion–π interaction and vice versa. Moreover, the symmetry-adapted perturbation theory (SAPT) partition scheme was used to study the different energy contributions to the interaction energies and to investigate the physical nature of the interplay between both interactions. Furthermore, the Atoms in Molecules (AIM) theory and the Non-Covalent Interaction (NCI) approach were used to analyze the two interactions further. Finally, a few examples from the Protein Data Bank (PDB) are shown. All results stress that the concurrent formation of both interactions may play an important role in biological systems due to the ubiquity of CH bonds, phenyl rings, and anions in biomolecules.
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