A. Abo-AllelaDoaa, A. AmerFatma, M. NafeaRamadan, A HafezRaghda
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DNA was extracted by QIAamp DNA Mini Kit, and real time PCR amplification of 16s r-RNA gene was used for diagnosis of Legionella genus. Risk factors were analyzed by logistic regression analysis. Results: Legionella genus was identified in eight out of 50 patients of CAP (16%), and ten out of 50 patients with HAP (20%). As regards CAP, Legionella was prevalent in old- age, smoker males, with diabetes mellitus (DM) and/or chronic obstructive pulmonary disease (COPD). Gastrointestinal tract (GIT) and neurological manifestations were the main presentations. Seventy-five percent needed ICU admission. Concerning HAP, hospitalization for more than ten days and having a stroke or head trauma were significant risk factors. Ten out of the 25 water samples tested were positive for Legionella genus; seven samples were from the chest department and three were from emergency ICU. No water-contamination with Legionella was found in the surgery ICU. Discussion: diagnosis of Legionella should be considered for both CAP and HAP in our locality. Periodic surveillance for detection of that genu s with subsequent disinfection of water sources when indicated should be carried out.","PeriodicalId":22518,"journal":{"name":"The International Arabic Journal of Antimicrobial Agents","volume":"194 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2016-06-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"5","resultStr":"{\"title\":\"Prevalence of Legionella among pneumonia patients and environmental water samples in an Egyptian University Hospital\",\"authors\":\"A. Abo-AllelaDoaa, A. AmerFatma, M. NafeaRamadan, A HafezRaghda\",\"doi\":\"10.3823/786\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Abstract Objectives: to diagnose Legionella infection in community- acquired pneumonia (CAP) cases admitted to chest department of Zagazig University Hospital and in hospital- acquired pneumonia (HAP) patients hospitalized in the emergency and surgery ICU, to determine incidence of these disease condition and to identify risk factors. Another objective was to determine the occurrence of Legionella genus in the water of these departments. Subjects and methods: one hundred pneumonic patients; 50 patients with CAP and 50 with HAP were the subject of this laboratory-based, comparative cross sectional study. Full clinical history and lower respiratory tract specimens were collected from each patient. Water samples were taken from 25 water outlets. DNA was extracted by QIAamp DNA Mini Kit, and real time PCR amplification of 16s r-RNA gene was used for diagnosis of Legionella genus. Risk factors were analyzed by logistic regression analysis. Results: Legionella genus was identified in eight out of 50 patients of CAP (16%), and ten out of 50 patients with HAP (20%). As regards CAP, Legionella was prevalent in old- age, smoker males, with diabetes mellitus (DM) and/or chronic obstructive pulmonary disease (COPD). Gastrointestinal tract (GIT) and neurological manifestations were the main presentations. Seventy-five percent needed ICU admission. Concerning HAP, hospitalization for more than ten days and having a stroke or head trauma were significant risk factors. Ten out of the 25 water samples tested were positive for Legionella genus; seven samples were from the chest department and three were from emergency ICU. No water-contamination with Legionella was found in the surgery ICU. Discussion: diagnosis of Legionella should be considered for both CAP and HAP in our locality. Periodic surveillance for detection of that genu s with subsequent disinfection of water sources when indicated should be carried out.\",\"PeriodicalId\":22518,\"journal\":{\"name\":\"The International Arabic Journal of Antimicrobial Agents\",\"volume\":\"194 1\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2016-06-09\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"5\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"The International Arabic Journal of Antimicrobial Agents\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.3823/786\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"The International Arabic Journal of Antimicrobial Agents","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3823/786","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 5
摘要
摘要目的:对扎加齐格大学附属医院胸科收治的社区获得性肺炎(CAP)患者和急诊及外科ICU收治的医院获得性肺炎(HAP)患者进行军团菌感染诊断,确定其发病情况并识别危险因素。另一个目的是确定军团菌属的发生在这些部门的水。研究对象和方法:100例肺炎患者;本研究以实验室为基础,对50例CAP患者和50例HAP患者进行了比较横断面研究。收集所有患者的完整临床病史和下呼吸道标本。从25个出水口抽取水样。采用QIAamp DNA Mini Kit提取DNA,实时PCR扩增16s r-RNA基因用于军团菌属诊断。采用logistic回归分析危险因素。结果:50例CAP患者中检出军团菌8例(16%),50例HAP患者中检出军团菌10例(20%)。在CAP方面,军团菌在老年、吸烟、患有糖尿病和/或慢性阻塞性肺病的男性中普遍存在。胃肠道(GIT)和神经系统表现为主要表现。75%的患者需要进入ICU。住院10天以上、卒中或头部外伤是HAP的显著危险因素。25个水样中有10个对军团菌属呈阳性反应;7例来自胸科,3例来自急诊ICU。外科ICU未发现军团菌水污染。讨论:本区军团菌的诊断应同时考虑CAP和HAP。应进行定期监测以发现该病毒,并在需要时对水源进行消毒。
Prevalence of Legionella among pneumonia patients and environmental water samples in an Egyptian University Hospital
Abstract Objectives: to diagnose Legionella infection in community- acquired pneumonia (CAP) cases admitted to chest department of Zagazig University Hospital and in hospital- acquired pneumonia (HAP) patients hospitalized in the emergency and surgery ICU, to determine incidence of these disease condition and to identify risk factors. Another objective was to determine the occurrence of Legionella genus in the water of these departments. Subjects and methods: one hundred pneumonic patients; 50 patients with CAP and 50 with HAP were the subject of this laboratory-based, comparative cross sectional study. Full clinical history and lower respiratory tract specimens were collected from each patient. Water samples were taken from 25 water outlets. DNA was extracted by QIAamp DNA Mini Kit, and real time PCR amplification of 16s r-RNA gene was used for diagnosis of Legionella genus. Risk factors were analyzed by logistic regression analysis. Results: Legionella genus was identified in eight out of 50 patients of CAP (16%), and ten out of 50 patients with HAP (20%). As regards CAP, Legionella was prevalent in old- age, smoker males, with diabetes mellitus (DM) and/or chronic obstructive pulmonary disease (COPD). Gastrointestinal tract (GIT) and neurological manifestations were the main presentations. Seventy-five percent needed ICU admission. Concerning HAP, hospitalization for more than ten days and having a stroke or head trauma were significant risk factors. Ten out of the 25 water samples tested were positive for Legionella genus; seven samples were from the chest department and three were from emergency ICU. No water-contamination with Legionella was found in the surgery ICU. Discussion: diagnosis of Legionella should be considered for both CAP and HAP in our locality. Periodic surveillance for detection of that genu s with subsequent disinfection of water sources when indicated should be carried out.