基于u - net的子宫内膜癌细胞图像分割新模型U-Net_dc

Inf. Comput. Pub Date : 2023-06-28 DOI:10.3390/info14070366
Zhanlin Ji, Dashuang Yao, R. Chen, Tao Lyu, Q. Liao, Li Zhao, Ivan Ganchev
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引用次数: 0

摘要

突变的细胞可能是癌症的一个来源。细胞图像分割作为一种量化癌变程度的有效方法,对于了解疾病发生机制、观察癌细胞病变程度、提高治疗效率和药物的有用效果都具有特别重要的意义。然而,由于癌细胞密度大、形状大小不一,传统的图像分割模型并不是理想的癌细胞图像分割方案。为了解决这一问题,本文提出了一种新的基于U-Net的图像分割模型U-Net_dc,该模型将原来的U-Net编码器和解码器扩展了一倍,并在它们之间使用了跳过连接操作,以便更好地提取图像特征。此外,最后几个U-Net层的特征图被上采样到相同的大小,然后连接在一起产生最终的输出,这使得最终的特征图保留了许多深层次的特征。此外,在编码器和解码器之间引入密集亚鲁斯卷积(dense atrous convolution, DAC)和残差多核池(residual multikernel pooling, RMP)模块,帮助模型获得不同大小的接受域,更好地提取丰富的特征表达式,检测不同大小的对象,更好地获取上下文信息。根据清华大学子宫内膜癌细胞私人数据集和公开的数据科学碗2018 (DSB2018)数据集进行的实验结果,基于所使用的所有评估指标,所提出的U-Net_dc模型优于性能比较研究中包含的所有最先进的模型。
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U-Net_dc: A Novel U-Net-Based Model for Endometrial Cancer Cell Image Segmentation
Mutated cells may constitute a source of cancer. As an effective approach to quantifying the extent of cancer, cell image segmentation is of particular importance for understanding the mechanism of the disease, observing the degree of cancer cell lesions, and improving the efficiency of treatment and the useful effect of drugs. However, traditional image segmentation models are not ideal solutions for cancer cell image segmentation due to the fact that cancer cells are highly dense and vary in shape and size. To tackle this problem, this paper proposes a novel U-Net-based image segmentation model, named U-Net_dc, which expands twice the original U-Net encoder and decoder and, in addition, uses a skip connection operation between them, for better extraction of the image features. In addition, the feature maps of the last few U-Net layers are upsampled to the same size and then concatenated together for producing the final output, which allows the final feature map to retain many deep-level features. Moreover, dense atrous convolution (DAC) and residual multi-kernel pooling (RMP) modules are introduced between the encoder and decoder, which helps the model obtain receptive fields of different sizes, better extract rich feature expression, detect objects of different sizes, and better obtain context information. According to the results obtained from experiments conducted on the Tsinghua University’s private dataset of endometrial cancer cells and the publicly available Data Science Bowl 2018 (DSB2018) dataset, the proposed U-Net_dc model outperforms all state-of-the-art models included in the performance comparison study, based on all evaluation metrics used.
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