喀麦隆本地山羊(Capra hircus)繁殖基因BMP15、BMPR 1B和GDF9的多态性

GABJ Pub Date : 2021-11-28 DOI:10.46325/GABJ.V4I1.705
Patrick Wouobeng, Jaurès Kouam Simo, F. Meutchieye, Manjeli Yacouba, M. Agaba
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Chi-square was used to test the association between genetic polymorphism and prolificacy of local goat. The main results showed that BMP15 gene is monomorphic, whereas the two other genes (BMPR1B and GDF9) display polymorphism. For BMPR1B gene, the ten mutations found did not change the corresponding amino acid. Allelic and genotypes frequencies of mutations of this gene varied from one mutation to another and between the two groups of females (high and low prolificacy). Chi-square test of the polymorphism of this gene shows that C34T and A120G mutations of exon 3 are significantly associated (p < 0.05) with prolificacy and can be considered as potential genetic markers for improving prolificacy in the native goat. For the GDF9 gene, three mutations were detected in exon 1 with alleles A and G1 of frequency 0.261 and 0.130 for A35G; G2 and C1 of frequency 0.696 and 0.304 for G81C; then G3 and C2 of frequency 0.696 and 0.304 for G255C. 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引用次数: 0

摘要

主要目的是为了更好地了解当地山羊的分子特征,以提高其生产力,特别是:分析三个繁殖基因(BMP15, BMPR1B和GDF9)的遗传多态性,并测试遗传多态性与当地山羊繁殖能力的关系。收集446只羊的组织样本,选取24只具有代表性的母山羊,分析其繁殖基因的遗传多态性。选择的山羊分为高胎率组12只(4胎次连续3只以上)和低胎率组12只(4胎次连续2只以下)。采用卡方法检验遗传多态性与地方山羊繁殖能力的关系。主要结果表明,BMP15基因为单态,而BMPR1B和GDF9基因为多态性。对于BMPR1B基因,发现的10个突变没有改变相应的氨基酸。该基因的等位基因和基因型突变频率在不同的突变和两组雌性之间(高和低繁殖)有所不同。该基因多态性的卡方检验显示,外显子3的C34T和A120G突变与繁殖能力显著相关(p < 0.05),可以考虑作为提高本地山羊繁殖能力的潜在遗传标记。GDF9基因外显子1检测到3个突变,等位基因A和G1的频率分别为0.261和0.130;G2、C1频率分别为0.696、0.304;G3和C2频率分别为0.696和0.304。突变G81C和G255C出现在BLAST下,分别为错义突变P27A和A85G,而A35G位于该基因的非翻译5 '区。卡方检验表明,各位点各基因型与繁殖能力之间无显著性差异(P > 0.01)。在C881T和A1160G位点外显子2上分别检测到C和T、A和G等位基因突变。这两个突变分别使蛋白质中273位的丙氨酸变为缬氨酸,397位的缬氨酸变为异亮氨酸。突变的等位基因和基因型频率因突变而异,在两组雌性之间也不同(高和低繁殖)。多态性卡方检验表明,C881T和A1160G突变与繁殖力无显著相关(P > 0.05),但氨基酸变异的等位基因增加了雏鸡的窝产仔数。因此,进一步增加样本量的研究将有助于验证结果。
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Polymorphism of Prolificacy Genes (BMP15, BMPR 1B and GDF9), in the Native Goat (Capra hircus) of Cameroon
The main objective was to contribute to a better understanding of molecular characteristics of the local goat in order to improve its productivity and specifically to: analyse genetic polymorphism of three prolificacy genes (BMP15, BMPR1B, and GDF9) and test the association of genetic polymorphism and prolificacy of local goats. Tissue samples were collected from 446 animals, and 24 representative female goats were selected to analyse the genetic polymorphism of the prolificacy genes. The selected goats were divided into two groups of 12 females for high prolificacy (more than three kids consecutively in four parity) and 12 females for low prolificacy (less than two kids consecutively in four parity). Chi-square was used to test the association between genetic polymorphism and prolificacy of local goat. The main results showed that BMP15 gene is monomorphic, whereas the two other genes (BMPR1B and GDF9) display polymorphism. For BMPR1B gene, the ten mutations found did not change the corresponding amino acid. Allelic and genotypes frequencies of mutations of this gene varied from one mutation to another and between the two groups of females (high and low prolificacy). Chi-square test of the polymorphism of this gene shows that C34T and A120G mutations of exon 3 are significantly associated (p < 0.05) with prolificacy and can be considered as potential genetic markers for improving prolificacy in the native goat. For the GDF9 gene, three mutations were detected in exon 1 with alleles A and G1 of frequency 0.261 and 0.130 for A35G; G2 and C1 of frequency 0.696 and 0.304 for G81C; then G3 and C2 of frequency 0.696 and 0.304 for G255C. The mutations G81C and G255C appeared under BLAST and were missense mutations P27A and A85G respectively while A35G is located in the non-translated 5’ region of the gene. Chi-square test between each genotype for any site and the prolificacy was not significant (P > 0.01) suggesting that these two characters are not associated. Two mutations were detected in exon 2 at C881T and A1160G sites with C and T and A and G alleles respectively. The two mutations changed the corresponding amino acid from Alanine to Valine at the position 273 in the protein and from Valine to Isoleucine at the position 397 in the protein respectively. Allelic and genotypes frequencies of mutations varied from one mutation to another and between the two groups of females (high and low prolificacy). Chi-square test of the polymorphism shows that, although C881T and A1160G mutations were not significantly associated (P > 0.05) with prolificacy, the alleles responsible for the variation of amino acid increased the litter size. Therefore, further studies with increased sample size will help to verify the results.
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