基于个体的生态系统模拟研究空间分布和时空信息对物种形成的影响

M. Mashayekhi, R. Gras
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引用次数: 14

摘要

本文利用基于个体的生态系统模拟(Ecosim),研究了物种的时空分布信息对物种形成的影响。为此,使用机器学习技术,我们试图预测一个物种是否会在不久的将来分裂。由于我们的数据集的不平衡性,我们使用smote算法来制作一个相对平衡的数据集,以避免忽略次要类样本。实验结果表明,通过与学习集相同的运行生成的测试集具有很好的预测效果。它还在不同运行Ecosim生成的测试集上显示了良好的结果。我们还观察到,当我们使用学习集时,与物种较少的运行相比,物种较多的运行效果更好。空间和时空信息对物种形成的预测是非常有效的。
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Investigating the Effect of Spatial Distribution and Spatiotemporal Information on Speciation using Individual-Based Ecosystem Simulation
In this paper, we investigate the impact of species’ spatial and spatiotemporal distribution information on speciation, using an individual-based ecosystem simulation (Ecosim). For this purpose, using machine learning techniques, we try to predict if one species will split in near future. Because of the imbalanced nature of our dataset we use smote algorithm to make a relatively balanced dataset to avoid dismissing the minor class samples. Experimental results show very good predictions for the test set generated from the same run as the learning set. It also shows good results on test sets generated from different runs of Ecosim. We also observe superior results when we use, for the learning set, a run with more species compare to a run with less species. Finally we can conclude that spatial and spatiotemporal information are very effective in predicting speciation.
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