肠杆菌科中一个假定的昆虫细胞内共生茎枝,基于DNA进化的异质模型进行系统发育分析推断

Hubert Charles, Abdelaziz Heddi, Yvan Rahbe
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引用次数: 45

摘要

昆虫胞内共生细菌(胞内共生细菌,或内胞共生细菌)被定位在γ - 3变形菌中,使用非均匀的DNA进化模型,允许位点之间的速率变化,序列之间的GC含量异质性,并应用于最大似然框架。其中大部分与肠杆菌科密切相关,位于Proteus和Yersinia之间。这些结果表明,这样一个细菌群可能具有允许昆虫感染和稳定建立共生关系的几个特征,并且这可能代表了许多昆虫内吞生物的主干分支。根据系统发育树中平衡GC含量和分支长度的估计,我们比较了这些不同共生体的相对年龄。
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A putative insect intracellular endosymbiont stem clade, within the Enterobacteriaceae, infered from phylogenetic analysis based on a heterogeneous model of DNA evolution

Insect intracellular symbiotic bacteria (intracellular endosymbionts, or endocytobionts) were positioned within the γ3-Proteobacteria using a non-homogeneous model of DNA evolution, allowing for rate variability among sites, for GC content heterogeneity among sequences, and applied to a maximum likelihood framework. Most of them were found to be closely related within the Enterobacteriaceae family, located between Proteus and Yersinia. These results suggest that such a bacterial group might possess several traits allowing for insect infection and the stable establishment of symbiotic relationships and that this could represent a stem clade for numerous insect endocytobionts. Based on the estimations of the equilibrium GC content and branch lengths in the phylogenetic tree, we have made comparisons of the relative ages of these different symbioses.

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