黄嘌呤氧化酶和2-氨基黄嘌呤作用机理的探讨:能量、电荷键序和波函数的含义。

Mamaru Bitew
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引用次数: 0

摘要

黄嘌呤氧化酶(Xanthine oxidase, XO)是一种重要的含钼酶,能催化次黄嘌呤羟基化成黄嘌呤和黄嘌呤羟基化成尿酸。黄嘌呤氧化酶氧化嘌呤衍生物的机理尚不清楚。更好地了解其整体机制应该可以增强我们控制由该酶代谢的潜在药物分子的代谢特性的能力。在这项工作中,一个模型底物,2-氨基黄嘌呤已经被用来研究酶的机制作用。因此,本文的理论工作旨在探索黄嘌呤氧化酶氧化2-氨基黄嘌呤的统一机制。采用B3LYP理论水平的DFT方法,以6-31G(d’,p’)基为非金属基,以LanL2DZ基为钼基,生成总电子能、Mulliken原子电荷、波函数和化学碎片贡献百分比等参数。采用以单点能量输出为输入文件的AOmix软件包进行波函数和百分比碎片分析。根据这些结果,以2-氨基黄嘌呤为模型底物,报道了新的反应中间体和合理的反应机理。在这项工作中可以得出结论,氢键反应配合物和活性位点类似于非常快速的Mo (V)中间体的逐步机理路线是最合理的。
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Probing the mechanism of xanthine oxidase and 2-amino xanthine: an implication of energy, charge bond order and wave function.
Xanthine oxidase (XO) is an important molybdenum-containing enzyme catalyzing the hydroxylation of hypoxanthine to xanthine and xanthine to uricacid. The mechanistic action by which xanthine oxidase oxidizes purine derivatives is not well understood. A better understanding of the overall mechanism is supposed to enhance our ability to control the metabolic properties of potential drug molecules metabolized by this enzyme. In this work a model substrate, 2-Amino Xanthine has been used to study the mechanistic action of the enzyme. For this reason, the present theoretical work was intended to probe a unified mechanism for the oxidation of 2-Amino Xanthine by xanthine oxidase. Parameters like total electronic energy, Mulliken atomic charges, wave functions, and percent contribution of chemical fragments were generated using a DFT method employing B3LYP level of theory with 6-31G(d',p') basis set for nonmetals and LanL2DZ basis set for molybdenum. AOmix software package that employs single point energy output as an input file was employed for wave function and percent fragment analysis. From these result new reaction intermediates and plausible reaction mechanism root has been reported for reductive and oxidative half reaction using 2-Amino Xanthine as model substrate. In this work it can be concluded that a stepwise mechanistic route with hydrogen bonding reaction complex and active site resemble very rapid Mo (V) intermediate is most plausible.     
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